| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10014646 |
| Family | GH10 |
| Protein Properties | Length: 458 Molecular Weight: 52925.9 Isoelectric Point: 7.6927 |
| Chromosome | Chromosome/Scaffold: 398 Start: 489992 End: 491625 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 218 | 397 | 0 |
| TTTSFPFGYGMNAYILNCSSYQQWFASRFKYTTFTNAMKWYSTEVIQGQENYTTPDAMLQFCKQNGISIRGHNILWDNPKEQPEWVKNLTGNKLREAAEE RIESVVSRYKVELIAWDVVNENLHFSFFEDRLGKDASAHFFREAPMIDPDVRLFMNEYNTVENNRDKTAHPVNYLKRFEE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 458 Download |
| MKREGAFLFI LFCMFLHSEG LPYDYSATTD ARQAFQYFLF SQCSVWDLEV FTFVYSILQC 60 LAARGRPLYD GGIMDNTTHW VANRTWEVYL DKRNLYEFSA WLQINKGSGI VVDAVFRRST 120 GEVHNVGRAI AREGCWSMLK GGFSPNFSGY VEILFQSEED PTAEIRAERI SLQPFTVQQW 180 RSHQDQSIEK IRKSNVRFRI TDPNGKPLPN AVVTFNQTTT SFPFGYGMNA YILNCSSYQQ 240 WFASRFKYTT FTNAMKWYST EVIQGQENYT TPDAMLQFCK QNGISIRGHN ILWDNPKEQP 300 EWVKNLTGNK LREAAEERIE SVVSRYKVEL IAWDVVNENL HFSFFEDRLG KDASAHFFRE 360 APMIDPDVRL FMNEYNTVEN NRDKTAHPVN YLKRFEEILA YPGNARIPAG ISLQTSSFGY 420 GKLLVCKPIV AHWDCPCGSL KYLCTRDRIK ESTWSRS* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 1.0e-26 | 225 | 397 | 182 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 9.0e-42 | 222 | 397 | 185 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 3.0e-48 | 255 | 397 | 154 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002313181.1 | 0 | 44 | 422 | 16 | 427 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313182.1 | 0 | 76 | 422 | 55 | 398 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002313183.1 | 0 | 87 | 424 | 28 | 364 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532419.1 | 0 | 87 | 414 | 69 | 394 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002532422.1 | 0 | 59 | 414 | 22 | 409 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1i1x_A | 4e-22 | 224 | 436 | 18 | 231 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1i1w_A | 4e-22 | 224 | 436 | 18 | 231 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 4e-22 | 224 | 436 | 18 | 231 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1k6a_A | 7e-22 | 224 | 436 | 18 | 231 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| PDB | 1gor_A | 8e-22 | 224 | 436 | 18 | 231 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
