| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10015069 |
| Family | GT43 |
| Protein Properties | Length: 311 Molecular Weight: 35209.4 Isoelectric Point: 10.1328 |
| Chromosome | Chromosome/Scaffold: 54 Start: 353682 End: 355412 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 141 | 298 | 0 |
| LAHTLRLVPPPLMWVVVEKARPTKSEMKELPEMLRMTKVMYRHILYWDHFTDEEAELEHQRNLGLKLLEYHRLNGIVHFAGIHDIYDLHFFKELRQIHKL GRWPAALVRGGDEVVIQQGPNCDSSKLTRWHLNHTKTLVHFNLAFNTSILWAHPSSSS | |||
| Full Sequence |
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| Protein Sequence Length: 311 Download |
| MGSLQRSKKV DEVWKKAVAH FVLCFVMGFF TGFTPTDRSS IPVTTTTTTR PTPTTARSDI 60 SSNSLSTSLH FSPNKIASLN SAATKPNTTR KLASKADPVS NSTAAGEPKP EDSAGPKERL 120 IIIITPANGR DWYQMVYLRR LAHTLRLVPP PLMWVVVEKA RPTKSEMKEL PEMLRMTKVM 180 YRHILYWDHF TDEEAELEHQ RNLGLKLLEY HRLNGIVHFA GIHDIYDLHF FKELRQIHKL 240 GRWPAALVRG GDEVVIQQGP NCDSSKLTRW HLNHTKTLVH FNLAFNTSIL WAHPSSSSSS 300 QHTSQVIDYF * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 5.0e-30 | 141 | 294 | 166 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 2.0e-37 | 119 | 294 | 185 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| PLN02458 | PLN02458 | 1.0e-85 | 1 | 305 | 322 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ54338.1 | 0 | 1 | 291 | 1 | 295 | glycuronosyltransferase-like protein [Gossypium hirsutum] |
| GenBank | ABP65661.1 | 0 | 1 | 305 | 1 | 304 | secondary wall-associated glycosyltransferase family 43B [Populus tremula x Populus alba] |
| EMBL | CAI93178.1 | 0 | 1 | 305 | 1 | 305 | glycosyltransferase [Populus balsamifera] |
| RefSeq | XP_002323456.1 | 0 | 1 | 305 | 1 | 305 | glycosyl transferase [Populus trichocarpa] |
| RefSeq | XP_002326337.1 | 0 | 1 | 305 | 1 | 301 | glycosyl transferase [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.0000008 | 121 | 270 | 5 | 160 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1v84_A | 0.0000008 | 121 | 270 | 5 | 160 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1v83_B | 0.0000008 | 121 | 270 | 5 | 160 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1v83_A | 0.0000008 | 121 | 270 | 5 | 160 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1v82_B | 0.0000008 | 121 | 270 | 5 | 160 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG231315 | 208 | 31 | 238 | 0 |
| JG245938 | 146 | 162 | 307 | 0 |
| JG233767 | 142 | 166 | 307 | 0 |
| JG192638 | 148 | 1 | 148 | 0 |
| GR714807 | 314 | 1 | 291 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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