Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10015259 |
Family | CBM43 |
Protein Properties | Length: 263 Molecular Weight: 27403.9 Isoelectric Point: 6.7611 |
Chromosome | Chromosome/Scaffold: 924 Start: 184429 End: 185611 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 120 | 201 | 1.5e-34 |
WCIASPSASETALQVALDYACGYGADCSSIQAGASCYNPNTLRDHASYAFNAYYQKNPATTSCVFGGTALLTSTDPSNGNCH |
Full Sequence |
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Protein Sequence Length: 263 Download |
MGFLRHLQSF LVVLLYLLYM SGASVAEPHP LKAIPDSKLM QNRVYHRQLF RSSSISTTQL 60 DTTTGDVPIV NLTSPNALPI ADPIDSPPEP STTIPTQTPP APVSGNPQPT TPTASGKGQW 120 CIASPSASET ALQVALDYAC GYGADCSSIQ AGASCYNPNT LRDHASYAFN AYYQKNPATT 180 SCVFGGTALL TSTDPSNGNC HYASSKNQPS MNPPLTDMAP PYPGGVAQPP GPSSATSVSS 240 NLLMVCSLAV GMLGSLTITK HL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02217 | PLN02217 | 0.007 | 52 | 135 | 87 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam07983 | X8 | 3.0e-25 | 119 | 188 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-42 | 119 | 202 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94231.1 | 0 | 1 | 262 | 1 | 304 | unknown [Populus trichocarpa] |
EMBL | CBI30817.1 | 2.99878e-43 | 118 | 225 | 33 | 143 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271903.1 | 1.00053e-42 | 118 | 225 | 128 | 238 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276666.1 | 1e-38 | 72 | 200 | 387 | 516 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002519744.1 | 0 | 25 | 262 | 18 | 282 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-19 | 111 | 207 | 4 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |