y
Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10015379 |
Family | GT8 |
Protein Properties | Length: 836 Molecular Weight: 93187.9 Isoelectric Point: 7.1856 |
Chromosome | Chromosome/Scaffold: 635 Start: 221249 End: 230051 |
Description | galacturonosyltransferase 13 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 475 | 805 | 0 |
CLSLRLTDEYSSNAHARRQLPAPELLPLLSDNSYHHFILSTDNILAASVVVTSTVASSKTPEKIVFHVVTDKKTYAGMHSWFALNPVSPAIIEVKGVHQF DWLTRDNVPVLEAVENHNGIRNYYHGNHVAGANLSDTTPRMFASKLQARSPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLKGKVN GAVETCKGVDEWVMSKRFKNYFNFSHPLISNNLDPQECAWAYGMNIFDLHTWRETTIRETYHSWLRENLKSNLTMWKLGTLPPALIAFKGHVHAIEPEWH MLGLGYQNLTDIESVKKAAVIHYNGQSKPWS |
Full Sequence |
---|
Protein Sequence Length: 836 Download |
MTEACVRALV EAIHSAPSQA VIYLSGGASQ SLGLLMSVPG ASSTVLEALV PYSRLSTVDL 60 LGKIPSNFCS QQTAEEMALL AYNRALKLSS PGVPVIGVGF TGSLATSRPK LGDHRFHLST 120 RTCNQLYLST ITLSKAGGMR TREEEDTVSS QFLLKAMGKA CQVEQPSGSP LSESDSLDEY 180 EKQFTEDEEL QQVIDGQICF KMYPFSDAPK NERKIILPGS FNPLHEGHLK LLEVATSIGG 240 DGYPCFEISA VNADKPPLSV SQIKDRVNQF RKVGKTIIVS NQPYFYKKAA LFPGSAFVIG 300 VDTAARKMVD ILGACKARGS TFLVGGRSMD GAFKILGDLE IPEELKDMFI AIPAEMRSNI 360 CFLLLLLATA SDCLGRRLGP RLLGRVDDSG QRLVKDLHKI LNQVNTEEIP DGLKLPESFS 420 ELVSEMKSNQ YDAKTFGLTL RAMMEKFERE IRESKFAELM NKHFAASSIP KGIHCLSLRL 480 TDEYSSNAHA RRQLPAPELL PLLSDNSYHH FILSTDNILA ASVVVTSTVA SSKTPEKIVF 540 HVVTDKKTYA GMHSWFALNP VSPAIIEVKG VHQFDWLTRD NVPVLEAVEN HNGIRNYYHG 600 NHVAGANLSD TTPRMFASKL QARSPKYISL LNHLRIYLPE LFPNLDKVVF LDDDVVIQRD 660 LSPLWDIDLK GKVNGAVETC KGVDEWVMSK RFKNYFNFSH PLISNNLDPQ ECAWAYGMNI 720 FDLHTWRETT IRETYHSWLR ENLKSNLTMW KLGTLPPALI AFKGHVHAIE PEWHMLGLGY 780 QNLTDIESVK KAAVIHYNGQ SKPWSPIGFE HLRPFWTKYV NYSNDFIRNC HIMET* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02742 | PLN02742 | 2.0e-118 | 418 | 832 | 422 | + Probable galacturonosyltransferase | ||
PLN02829 | PLN02829 | 7.0e-119 | 415 | 832 | 428 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 1.0e-153 | 416 | 833 | 424 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 372 | 835 | 464 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 397 | 832 | 437 | + Probable galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0009058 | biosynthetic process |
GO:0016757 | transferase activity, transferring glycosyl groups |
GO:0016779 | nucleotidyltransferase activity |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI22287.1 | 0 | 368 | 835 | 44 | 511 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284273.1 | 0 | 368 | 835 | 67 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305374.1 | 0 | 368 | 835 | 61 | 527 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002324094.1 | 0 | 368 | 835 | 61 | 527 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002526079.1 | 0 | 368 | 835 | 75 | 540 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.000002 | 626 | 804 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.000002 | 626 | 804 | 77 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.000002 | 626 | 804 | 77 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 3do8_B | 0.005 | 214 | 240 | 2 | 28 | A Chain A, The Crystal Structure Of The Protein With Unknown Function From Archaeoglobus Fulgidus |
PDB | 3do8_A | 0.005 | 214 | 240 | 2 | 28 | A Chain A, The Crystal Structure Of The Protein With Unknown Function From Archaeoglobus Fulgidus |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO798511 | 273 | 372 | 644 | 0 |
HO798511 | 171 | 657 | 827 | 0 |
JG478274 | 284 | 553 | 836 | 0 |
GT033906 | 359 | 470 | 828 | 0 |
ES903477 | 286 | 457 | 742 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|