| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10015417 |
| Family | CBM57 |
| Protein Properties | Length: 720 Molecular Weight: 78999 Isoelectric Point: 8.3183 |
| Chromosome | Chromosome/Scaffold: 635 Start: 409467 End: 414475 |
| Description | receptor like protein 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 306 | 452 | 4e-26 |
| GDQWGGDRFWGPITSFSQSSDQARSTEGGIKQASNAPNFYPEALYQTAIVGTDAQPDLEYTIDVEPSRNYSIWLHFAEIDAAVTNVGERVFDILVNGDVV FKEVDVMKMTGAHHTAVVLNTTVPIDGRSLTITLSPKQGNHAIINAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 720 Download |
| MAPISKSKVA LDVAADRETG ESLSFAGFIS VQDQEPKKSY DPRKMNKLDE QEFEFRCTVP 60 APVGKSNRRT RNHERRKRSA AAGSGRRSFF RSFFWPCKEC RVKNSVVEPG VQGPVTPWII 120 RISCGSRVNV NTEPTNTRWY KDFAYTGGIP SNRTTPPSFL TPPLKTLRYF PLSAGPNNCY 180 NIHRVPKGHY TVRVFFGLID HPDFNDEALF DVSVQGTQVY SLQSGWSGQD DQTFVEAQVF 240 LLDGASSICF HSTGHGDPAI VSIEILQIDN DAYNYGPGWG QGVMMRTVRR LSCGNGKPRF 300 DVGYSGDQWG GDRFWGPITS FSQSSDQARS TEGGIKQASN APNFYPEALY QTAIVGTDAQ 360 PDLEYTIDVE PSRNYSIWLH FAEIDAAVTN VGERVFDILV NGDVVFKEVD VMKMTGAHHT 420 AVVLNTTVPI DGRSLTITLS PKQGNHAIIN AIEIFEVFRA ESKTLPQEVA ALQKLKTALG 480 LPLRFGWNGD PCVPQQHPWS GANCQFDSTS FRWFIDGLDL DNQGLKGFLP DDIFKLQYLQ 540 SINLSGNAIH GSIPSPIGNI SSLEVLDFSY NLFNGSIPES LGQLSNLRRL NLNGNHLSGR 600 VPAALGGRLL SGASFNFTDN SGLCGAPGLP TCGPHLTAGA KTGIAFGASF GFLLIVVCVT 660 CWCKRRQNIL RAKQIAARGA PYAKKRTHLS HDIQLSRPHY NNTSHHARTA AENGPSLLS* 720 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.002 | 119 | 263 | 161 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 5.0e-6 | 467 | 578 | 136 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 1.0e-16 | 287 | 452 | 178 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 2.0e-62 | 122 | 457 | 352 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 0 | 117 | 719 | 603 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30598.1 | 0 | 117 | 719 | 24 | 624 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_174156.1 | 0 | 117 | 719 | 26 | 626 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002279791.1 | 0 | 120 | 719 | 1 | 600 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305781.1 | 0 | 120 | 719 | 1 | 596 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509445.1 | 0 | 117 | 719 | 27 | 629 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 0.000000000000006 | 490 | 634 | 608 | 747 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 3rj0_A | 0.00000004 | 458 | 623 | 424 | 580 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 3rj0_A | 0.0000004 | 518 | 605 | 396 | 483 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 3rj0_A | 0.000003 | 539 | 605 | 393 | 459 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
| PDB | 3rj0_A | 0.004 | 527 | 606 | 329 | 436 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
