Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10015625 |
Family | GH35 |
Protein Properties | Length: 870 Molecular Weight: 95928.8 Isoelectric Point: 9.0981 |
Chromosome | Chromosome/Scaffold: 630 Start: 103096 End: 107108 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 45 | 346 | 0 |
INGQRKILISGSIHYPRSTPEMWPDLILKAKEGGIDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFIKLVKDAGLYVHLRIGPYVCAEWNFGGFPVWLKYI PGISFRTDNGPFKAQMQKFTTKIVNMMKAERLFENQGGPIILSQIENEYGPMENEIGASGKAYTKWAADMALQLGTGVPWVMCKQDDAPDPIINTCNGFY CDYFSPNKDYKPKMWTEAWTGWFTEFGGAVPHRPAEDIAFAVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDL HR |
Full Sequence |
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Protein Sequence Length: 870 Download |
MASRSFTITK NSHNVFSILI SSIFLVLCFC SVSATVTYDS TAIKINGQRK ILISGSIHYP 60 RSTPEMWPDL ILKAKEGGID VIQTYVFWNG HEPSPGKYYF EGNYDLVKFI KLVKDAGLYV 120 HLRIGPYVCA EWNFGGFPVW LKYIPGISFR TDNGPFKAQM QKFTTKIVNM MKAERLFENQ 180 GGPIILSQIE NEYGPMENEI GASGKAYTKW AADMALQLGT GVPWVMCKQD DAPDPIINTC 240 NGFYCDYFSP NKDYKPKMWT EAWTGWFTEF GGAVPHRPAE DIAFAVARFI QKGGSFINYY 300 MYHGGTNFGR TAGGPFIATS YDYDAPLDEY GLLRQPKWGH LKDLHRAIKL CEPALVSGIA 360 PTVTPLGRYQ EARVFRTKSG ACSAFLANYN SRSYAKVSFG NMHYNLPPWS ISILPDCKNT 420 VYNTARVGAQ TSTMKMTPVP RRGGGGFSWQ AYSEEPSVDG DKSFTMAGLL EQINTTRDGT 480 DYLWYMTDIR VLNLVIMILL LQCTNKIRRE LLRTGNHPVL TVKSAGHALH VYVNGRLAGT 540 AYGSLESPKL TFSQGVNLRA GINRIALLSI AVGLPNVGPH FETWNAGILG PVMLTGLNEG 600 RKDLSWQKWT YKVGMKGEHL SLHSLSGSPS VEWAQGSVVS QRQPLMWYKT TFNAPAGNAP 660 LALDMATMSK GQAWINGQSV GRYWPAYKAA SSGGSCTGCS YAGTYNEKKC SSNCGEPSQR 720 WYHVPRSWLK PTGNLLVVFE ESGGDPNGIS LVRREVDTIC ADIYEWQPTL MNYQMQASGK 780 ANKPLRPKVH LSCGPGQKMS SIKFASFGTP QGTCGSYRQG GCHAFHSYDA FNKLCVGQNS 840 CSVTVAPGMF GGDPCPKVMK KLAVEAICS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 8.0e-8 | 64 | 194 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 5.0e-22 | 791 | 868 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 7.0e-25 | 36 | 338 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 6.0e-166 | 45 | 348 | 319 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 10 | 869 | 862 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 30 | 869 | 27 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ABV32545.1 | 0 | 31 | 869 | 23 | 841 | beta-galactosidase protein 2 [Prunus persica] |
EMBL | CAC44500.1 | 0 | 28 | 869 | 22 | 843 | beta-galactosidase [Fragaria x ananassa] |
RefSeq | XP_002327432.1 | 0 | 30 | 869 | 20 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 8 | 869 | 5 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 45 | 344 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3.00018e-42 | 36 | 419 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3.00018e-42 | 36 | 419 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |