Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10016532 |
Family | GT47 |
Protein Properties | Length: 524 Molecular Weight: 61217.1 Isoelectric Point: 8.7545 |
Chromosome | Chromosome/Scaffold: 279 Start: 383874 End: 385445 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 82 | 426 | 0 |
CSGKYIYVHEIPSEFNSDILEQCRSLNPWMDMCPFITNMGLGPKLRSSEKVVSNSGWFETNQFVLEVIFHNRMKQYKCLTNDSSKASAIFVPYYAGLDVA RYLWSNNSTASIRDRYSIELINWIRDKPEWRRMWGRDHFLVAGRISWDFRRVTDKDEHWGNKLMVLPEAKNMTMLTIESSPWNENDFGIPYPTDFHPASD SQVFYWQRRMSRIRRRTLFSFAGAPRPNLKNSIRNEIIEQCKSNRRRCQLLGCHPSSKKCNDPSNLMRMFQNSVFCLQPPGDSYTRRSTFDSILAGCIPV FFHPGSAYIQYLWHFPKDYTKYSVFIPENEVKEGKASIETILSRI |
Full Sequence |
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Protein Sequence Length: 524 Download |
MDMPVIATTR IRIWYFILAF FVLWIFLLAA FFSDNTEVVV VEPNPANATT VDRFFVDGGW 60 DKYVQQAEDI PEEKIVRRID PCSGKYIYVH EIPSEFNSDI LEQCRSLNPW MDMCPFITNM 120 GLGPKLRSSE KVVSNSGWFE TNQFVLEVIF HNRMKQYKCL TNDSSKASAI FVPYYAGLDV 180 ARYLWSNNST ASIRDRYSIE LINWIRDKPE WRRMWGRDHF LVAGRISWDF RRVTDKDEHW 240 GNKLMVLPEA KNMTMLTIES SPWNENDFGI PYPTDFHPAS DSQVFYWQRR MSRIRRRTLF 300 SFAGAPRPNL KNSIRNEIIE QCKSNRRRCQ LLGCHPSSKK CNDPSNLMRM FQNSVFCLQP 360 PGDSYTRRST FDSILAGCIP VFFHPGSAYI QYLWHFPKDY TKYSVFIPEN EVKEGKASIE 420 TILSRIPKRR VAEMREEVIR LIPTVVYADP RSRLETLKDA FDRTVSGVLK RVERARKAME 480 VGKNLTVASE KEEESNWKKA TAVGDVVPHP WDHFFVREDE YKP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-68 | 81 | 426 | 361 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACY08857.1 | 0 | 78 | 517 | 153 | 590 | xyloglucan galactosyltransferase [Eucalyptus grandis] |
EMBL | CAN64889.1 | 0 | 80 | 504 | 298 | 717 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280815.1 | 0 | 80 | 515 | 91 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301846.1 | 0 | 65 | 517 | 103 | 557 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002313430.1 | 0 | 80 | 517 | 138 | 569 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |