Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10016539 |
Family | CBM43 |
Protein Properties | Length: 506 Molecular Weight: 55622.1 Isoelectric Point: 5.9707 |
Chromosome | Chromosome/Scaffold: 279 Start: 427056 End: 429016 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 377 | 459 | 3e-32 |
WCVPTSDASDEALQKNLDYVCSLGVDCRPIQDGGPCFSPNTVRSHASYAMNAYYQTYGHHYFNCDFERTGVVTSTDPSYEACS | |||
GH17 | 25 | 339 | 0 |
IGVNYGTWGDNLPPPSQVAEFLKTHTTIDRIKMFDANPDIIRAFADTGISVTVTVANADVPALSKLPAAQDWIAANILPFHPQTTIRYILVGNEVLYWKD RNVIAYTLPAMKTVHHALQLANLTDIKVTTPHALSFLAASEPPSTGVFKKFDGEILEPILDFHRRTKTPFMVNPYPFFGYRDEVKDYAVFRPSKGLYDKH TGINYTNMFDEQMDAVYSSMKKLGKGYEEDVEIVIGETGWPSAGDPNQPGVSLENALSYNGNVVKHVNSGKGTPLMPNRTFETYMFALFNENLKASISEK NYGLFRPDFTAVYDV |
Full Sequence |
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Protein Sequence Length: 506 Download |
MAQTSLIFLL LAYIFISPST SSYSIGVNYG TWGDNLPPPS QVAEFLKTHT TIDRIKMFDA 60 NPDIIRAFAD TGISVTVTVA NADVPALSKL PAAQDWIAAN ILPFHPQTTI RYILVGNEVL 120 YWKDRNVIAY TLPAMKTVHH ALQLANLTDI KVTTPHALSF LAASEPPSTG VFKKFDGEIL 180 EPILDFHRRT KTPFMVNPYP FFGYRDEVKD YAVFRPSKGL YDKHTGINYT NMFDEQMDAV 240 YSSMKKLGKG YEEDVEIVIG ETGWPSAGDP NQPGVSLENA LSYNGNVVKH VNSGKGTPLM 300 PNRTFETYMF ALFNENLKAS ISEKNYGLFR PDFTAVYDVG LMRSSPAQAP PTSNGTTTPG 360 KAPPSDGTNP APAEKQWCVP TSDASDEALQ KNLDYVCSLG VDCRPIQDGG PCFSPNTVRS 420 HASYAMNAYY QTYGHHYFNC DFERTGVVTS TDPSYEACSY PLTGLELLEV KKSVVKSMSP 480 RLVGLAFTEL LAAAGFVVSL LFRFV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0007 | 17 | 332 | 331 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-24 | 376 | 447 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-41 | 376 | 460 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-84 | 25 | 339 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283647.1 | 0 | 1 | 460 | 4 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002283660.1 | 0 | 1 | 460 | 4 | 404 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 17 | 454 | 19 | 447 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002312098.1 | 0 | 20 | 460 | 25 | 453 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532848.1 | 0 | 19 | 469 | 19 | 453 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 339 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 25 | 341 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 25 | 341 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 25 | 341 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 25 | 341 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |