y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10016655 |
Family | GH35 |
Protein Properties | Length: 881 Molecular Weight: 98217 Isoelectric Point: 6.7025 |
Chromosome | Chromosome/Scaffold: 915 Start: 481139 End: 488355 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 43 | 345 | 0 |
IIGGKRRMLISAGIHYPRATPQMWPDLIAKSKEGGADVIQTYVFWGGHEPVKGQYNFEGNFDLVKFVKLVGASGLYFHLRIGPYVCAEWNFGGFPVWLRD IPGIKFRTDNAPFKEEMQRFVTMIVDLMRDEQLFSWQGGPIIMLQIENEYGNIESSFGPGGKRYMQWAANMALGLGAGVPWVMCKQTDAPENIIDACNDY YCDGFKPNSPNKPVLWTENWDGWYTEWGEGLPHRPVEDLAFAVARFFQRGGSFQNYYMYFGGTNFGRTSGGPFYITSYDYDAPLDEYGLLREPKWGHLKD LHA |
Full Sequence |
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Protein Sequence Length: 881 Download |
MVASRRPPLL LVFCFTSLLY LATVVSANFF QPFNVTYDHR AIIIGGKRRM LISAGIHYPR 60 ATPQMWPDLI AKSKEGGADV IQTYVFWGGH EPVKGQYNFE GNFDLVKFVK LVGASGLYFH 120 LRIGPYVCAE WNFGGFPVWL RDIPGIKFRT DNAPFKEEMQ RFVTMIVDLM RDEQLFSWQG 180 GPIIMLQIEN EYGNIESSFG PGGKRYMQWA ANMALGLGAG VPWVMCKQTD APENIIDACN 240 DYYCDGFKPN SPNKPVLWTE NWDGWYTEWG EGLPHRPVED LAFAVARFFQ RGGSFQNYYM 300 YFGGTNFGRT SGGPFYITSY DYDAPLDEYG LLREPKWGHL KDLHAAIKLC EPALTATDSP 360 QYINWGSWRQ EAHVYENQSR CSAFIANIDE HKTVTVSFRG QSYVLPPWSV SILPDCKNVV 420 FNTAKVTAQT SIKNVEFALP LASGPSPRQF AAKRGGSLKS GSWLVVKEPI TIWSEKNFTT 480 KGILEHLNVT KDQSDYLWYF TRLYVSDDDV AFWEANQTSP AIIIDSMRDV LRIFVNGQLT 540 GSTTGKWVKV SQPVKLQKGY NDIVLLSQTM GLQNYGAFLE RDGAGFRGQT KITGFKDGDI 600 DLSSLFWTYQ IGLKGEFSKL YLKESNDETE WSDLMPNASP STFTWYKTYF DAPAGTDPVA 660 LDLGSMGKGQ AWVNGHHIGR YWTIVSPKNG CQPCNYAGAY RPEKCRTNCG NPTQTWYHVP 720 RSWLEESNNS VVLFEETGGN PFGVTVNVRS SPTVCGSVSE SDYPPVTKWS GPSSIDGRLS 780 ITDTAPEVHI RCKEGYTISS IEFASYGTPK GSCQKFAQGN CHAVDSFSLV SKACQGRNEC 840 HIAVSNDVFG DPCPKVIKTL AVEARCSSSS SSSSASVAEM * 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0007 | 57 | 193 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-20 | 35 | 337 | 352 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 4.0e-26 | 790 | 866 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 6.0e-159 | 41 | 347 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 5 | 866 | 867 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91079.1 | 0 | 1 | 870 | 1 | 888 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAE72075.1 | 0 | 1 | 870 | 1 | 887 | pear beta-galactosidase3 [Pyrus communis] |
RefSeq | XP_002263385.1 | 0 | 6 | 877 | 5 | 882 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
RefSeq | XP_002328900.1 | 0 | 1 | 871 | 1 | 885 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518051.1 | 0 | 25 | 871 | 30 | 891 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.94273e-44 | 41 | 343 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.00002 | 515 | 738 | 393 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-39 | 33 | 334 | 9 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-39 | 33 | 334 | 9 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |