Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10016858 |
Family | GH3 |
Protein Properties | Length: 682 Molecular Weight: 73554.7 Isoelectric Point: 8.2469 |
Chromosome | Chromosome/Scaffold: 153 Start: 281314 End: 284999 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 31 | 223 | 0 |
RPVTQVVSDEARAMYNGGAAGLTFWSPNVNIFRDPRWGRGQETPGEDPYLAGKYAASYVKGLQSVSGNRLKVAACCKHYTAYDLDNWNGVDRYHFNAQVS KQDLADTYDVPFKACVMEGNVASVMCSYNQVNGKPTCADPDLLKGTIRGQWHLNGYIVSDCDSVGVLYDNQHFTKTPEEAAAATIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 682 Download |
MLPVPPPPSL PLPSSPPPRR FLQLHPLGAN RPVTQVVSDE ARAMYNGGAA GLTFWSPNVN 60 IFRDPRWGRG QETPGEDPYL AGKYAASYVK GLQSVSGNRL KVAACCKHYT AYDLDNWNGV 120 DRYHFNAQVS KQDLADTYDV PFKACVMEGN VASVMCSYNQ VNGKPTCADP DLLKGTIRGQ 180 WHLNGYIVSD CDSVGVLYDN QHFTKTPEEA AAATIKAGLD LDCGPFLAIH TENAVKGGLL 240 TEEDVNLALA NTLTVQMRLG MFDGEPSAQP FGHLGPTDVC TPAHNQLALD AARQGIVLLQ 300 NRGKALPLST TRHRTIAVIG PNSDVTVTMI GNYAGVACGY TTPLQGIARY ARTFHQSGCS 360 DVTCAGNQQF SAAELIARQA DATVLVMGLD QSIEAEFRDR SGLLLPGHQQ ELISRVARVS 420 KGPTILVLMS GSPIDVTFAK NDPRISAIIW AGYPGQAGGT AIADVLFGTT NPHGKLPMTW 480 YPQNYISKVP MTDMGMRPDP RRGYPGRTYR FYKGPVVYPF GYGLTYARFG VAISNGPKQV 540 NVPLSTTSLT TLQQGNTSSL PSSAAIRTIH TDCESHAMSL DIEVDVKNTG SVDGIHTLLV 600 FSSPPEGDKW SANKQLIGFE KVNLVAGSSK LVRVNVRVCK HLSVVDQYGH RRIPFGQHHL 660 HIGDLKHSVL IQLGSNAIIK A* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 5.0e-49 | 33 | 360 | 335 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 6.0e-53 | 55 | 255 | 204 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-62 | 296 | 526 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-79 | 35 | 633 | 656 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 31 | 673 | 654 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD98523.1 | 0 | 33 | 672 | 134 | 766 | alpha-L-arabinofuranosidase / beta-D-xylosidase [Pyrus pyrifolia] |
DDBJ | BAF79669.1 | 0 | 33 | 672 | 134 | 766 | beta-D-xylosidase [Pyrus pyrifolia] |
RefSeq | XP_002311398.1 | 0 | 33 | 672 | 123 | 752 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316021.1 | 0 | 33 | 672 | 131 | 760 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 33 | 672 | 145 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 35 | 636 | 106 | 696 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3u48_A | 0 | 35 | 636 | 106 | 696 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3u4a_B | 0 | 35 | 636 | 106 | 696 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3u4a_A | 0 | 35 | 636 | 106 | 696 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 2x41_A | 6e-36 | 56 | 529 | 117 | 603 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG068931 | 310 | 219 | 528 | 0 |
GW867487 | 317 | 149 | 465 | 0 |
GW867089 | 307 | 72 | 378 | 0 |
GW866121 | 325 | 206 | 530 | 0 |
GW866226 | 304 | 159 | 462 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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