| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10017009 |
| Family | GT41 |
| Protein Properties | Length: 1394 Molecular Weight: 154353 Isoelectric Point: 7.7857 |
| Chromosome | Chromosome/Scaffold: 315 Start: 346265 End: 359619 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT41 | 365 | 887 | 0 |
| SIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAYNNLGVLYRDAGNISMAITAYEQCLKIDPDSRNAGQMCAFVINGHETYAVSNNCSLF SCPLALFYFLAETTSVAIASLMLLICILMQNRLLAMNYIHEGRDDELYETHRDWGRRFLRLYPQYTSWDNSKEPERPLAPLVYHDYSKFKVVVYSAVVKA DAKTNRFREKVLKKGGMWRDIYGIDEKRVAGLVRDDKVDILVELTGHTANNKLGTMACRPAPIQVTWIGYPNTTGLPSIDYRITDSLADPPGTKQKHVEE LVRLPESFLCYTPSPEAGLVSASPAVSNSFVTFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCSDSVRQKFLTTLEQLGLESLRVDLLPLILL NHDHMQAYSLMDISLDTFPYAGTTTTCESLFMGVPCVTMAGPVHAHNVGVSLLSKVGLGHLVAKNEDEYIQLAVNLASDVDALVRLRMSLRDLMAKSPLC DGANFILGLECSYREMWRRYCMG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1394 Download |
| MAFPEDAVGN GKEGEPAAGD NGFIERSESS PCTSCSPAAV ASLQKQFHGK DALNFANILR 60 SRNKFVDALT LYERVLEEDS RDVEAYIGKG ICLQMQNMGR LLSTVLLKRS GLNRRMHVLS 120 LTVAFFTKMR VVWLMLPSRM SYQKALTADP SYKPAAECLA IVLTDLGTSL KLSGNVQEGI 180 QKYYEALKID PHYPAAYYNL GVVYSEMMQY DTALTCYEKA ALERPMYAEA YCNMGVIYKN 240 RGDLESAIAC YERCLAVSPN FEIAKNNMAI ALTDLGTKVK LEGDINQGVI YYKKALYYNW 300 HYADAMYNLG VAYGELLKFD QAIVFYELAF HFNPHCAEAC NNLGVIYKDR DNLDKAVECY 360 QLALSIKPNF SQSLNNLGVV YTVQGKMDAA ASMIEKAILA NPTYAEAYNN LGVLYRDAGN 420 ISMAITAYEQ CLKIDPDSRN AGQMCAFVIN GHETYAVSNN CSLFSCPLAL FYFLAETTSV 480 AIASLMLLIC ILMQNRLLAM NYIHEGRDDE LYETHRDWGR RFLRLYPQYT SWDNSKEPER 540 PLAPLVYHDY SKFKVVVYSA VVKADAKTNR FREKVLKKGG MWRDIYGIDE KRVAGLVRDD 600 KVDILVELTG HTANNKLGTM ACRPAPIQVT WIGYPNTTGL PSIDYRITDS LADPPGTKQK 660 HVEELVRLPE SFLCYTPSPE AGLVSASPAV SNSFVTFGSF NNLAKITPKV LQVWARILCA 720 VPNSRLVVKC KPFCSDSVRQ KFLTTLEQLG LESLRVDLLP LILLNHDHMQ AYSLMDISLD 780 TFPYAGTTTT CESLFMGVPC VTMAGPVHAH NVGVSLLSKV GLGHLVAKNE DEYIQLAVNL 840 ASDVDALVRL RMSLRDLMAK SPLCDGANFI LGLECSYREM WRRYCMGDVP SLKRIELIQQ 900 QQGNSDVPSD NSQATTISSI ISSRDELHGS IKENGFAVVA ASPVRVLRPT GGINSWLHWL 960 PLPVHKRVDC LIRRIIFDGF GSLPSKILPS THRMTPFLSP KAGLSDILEA DANRIAEMAR 1020 DSFHRDGPLL VVASGRDTIP VASSIRRLAP ENVFVVQIQH PRSNLSRFDL VITPHHDYYP 1080 LTPHGQQQVP WFLRRWITPR EPPDSRVILT VGALHRADSA ALRAAASFWY EELQPLPKPL 1140 LIVNIGGPIG NCRYGADLAM QLTEMLQSVL WSCGSVRISF SRRTPEKHTL LLHRQNMSTT 1200 IDVPESSSVT KGKAPLIALA KHGKSGGYHR GVAIFDFILR IGAVISALAA AATMGTSDET 1260 LPFFTQFLQF QASYDDLPTF QFFVIAMGIV GGYLVLSLPF SIVCIVRPQA AAPRFLLLVL 1320 DIVVLTLNTA AASAAAAIVY LAHNGNSNTN WLAICNQFGD FCQKVSGSVV AAFVTVLIFV 1380 ILVILSAVAL RRH* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG0457 | NrfG | 3.0e-25 | 159 | 397 | 243 | + FOG: TPR repeat [General function prediction only] |
| COG0457 | NrfG | 2.0e-27 | 180 | 444 | 273 | + FOG: TPR repeat [General function prediction only] |
| pfam04535 | DUF588 | 1.0e-28 | 1230 | 1371 | 144 | + Domain of unknown function (DUF588). This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. |
| pfam06258 | Mito_fiss_Elm1 | 1.0e-38 | 996 | 1187 | 193 | + Mitochondrial fission ELM1. In plants, this family is involved in mitochondrial fission. It binds to dynamin-related proteins and plays a role in their relocation from the cytosol to mitochondrial fission sites. Its function in bacteria is unknown. |
| COG3914 | Spy | 1.0e-80 | 322 | 884 | 581 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| Swiss-Prot | O82039 | 0 | 1 | 941 | 1 | 907 | SPY_PETHY RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=PhSPY |
| RefSeq | XP_002281883.1 | 0 | 1 | 945 | 1 | 904 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308458.1 | 0 | 1 | 944 | 1 | 913 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002323412.1 | 0 | 1 | 940 | 1 | 906 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530535.1 | 0 | 1 | 942 | 1 | 905 | o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 1e-32 | 302 | 673 | 8 | 386 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 4gz6_D | 6e-23 | 695 | 890 | 524 | 715 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 4gz6_D | 0.000000000000005 | 142 | 272 | 32 | 155 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 4gz6_D | 0.000000000000009 | 163 | 310 | 12 | 152 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 4gz6_D | 0.00000002 | 191 | 344 | 6 | 152 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
