| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10017119 |
| Family | CE8 |
| Protein Properties | Length: 246 Molecular Weight: 26974.9 Isoelectric Point: 9.7373 |
| Chromosome | Chromosome/Scaffold: 216 Start: 350170 End: 351494 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 34 | 225 | 0 |
| GHQAVALRVQSDRSSFYNCRMDGYQDTLYQQAHYQFYRNCVISGTVDFIFGDSSALVQNCLIIVRMPMQGQQTTVTAQGKQDKNEVTGLVIQNCKIVPEA KLAPVTAKFPSFLGRPWKQYSMTIVMESIIGGFISPLGWMPWQGSMYLDTLFYGEYGNKGPGSGTGGRVNWKGYHVLTQKAQVLKYTAGPFL | |||
| Full Sequence |
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| Protein Sequence Length: 246 Download |
| MYGDGPRKTI VTGRKSFKDG VPTYGTASFS GAIGHQAVAL RVQSDRSSFY NCRMDGYQDT 60 LYQQAHYQFY RNCVISGTVD FIFGDSSALV QNCLIIVRMP MQGQQTTVTA QGKQDKNEVT 120 GLVIQNCKIV PEAKLAPVTA KFPSFLGRPW KQYSMTIVME SIIGGFISPL GWMPWQGSMY 180 LDTLFYGEYG NKGPGSGTGG RVNWKGYHVL TQKAQVLKYT AGPFLAASQW LPAAGIPFIS 240 GLRYP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 3.0e-93 | 1 | 242 | 260 | + pectinesterase | ||
| PLN02301 | PLN02301 | 2.0e-94 | 1 | 242 | 259 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 2.0e-101 | 1 | 242 | 259 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 1.0e-121 | 1 | 242 | 259 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-130 | 1 | 228 | 245 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26012.1 | 0 | 1 | 243 | 309 | 568 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI37070.1 | 0 | 1 | 243 | 1 | 260 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002275000.1 | 0 | 1 | 243 | 309 | 568 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275819.1 | 0 | 1 | 243 | 25 | 284 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| RefSeq | XP_002519324.1 | 0 | 1 | 245 | 309 | 570 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 3 | 242 | 63 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 1 | 242 | 57 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-17 | 36 | 150 | 129 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-17 | 36 | 150 | 129 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-17 | 36 | 150 | 129 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| GR194961 | 248 | 1 | 231 | 0 |
| EC951748 | 260 | 1 | 243 | 0 |
| EC935178 | 260 | 1 | 243 | 0 |
| EC955285 | 243 | 18 | 243 | 0 |
| EX252405 | 216 | 1 | 198 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Citrus sinensis | orange1.1g047675m | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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