Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10017338 |
Family | GH9 |
Protein Properties | Length: 560 Molecular Weight: 62321.6 Isoelectric Point: 7.0332 |
Chromosome | Chromosome/Scaffold: 511 Start: 162387 End: 167101 |
Description | cellulase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 258 | 554 | 0 |
LEKSILFFKGQRSGRLPSDQRLTWRGDSGLSDGFAYHVDLVGGYYDAGDNVKFGLPMAFTTTLLSWSVIEFGSSMGDEIENAKSAIRWSADYLLKAATAT PDTLYVQPNMDHRCWERPEDMDTPRTVYRVEPQNPGSDVAAETAAALAAASLVFKESDPRYSSKLLGTSVKVFSFADMYRGSYSDFLGSVVCPFYCSYSG YHDELLWGASWLHKASQNVTYLSYIQSNGHTLGAEDDDFSFSWDDKRPGTKVLLSKELPTFQAQYTPGGLLYKGTESNLQNVTSTTFLLLTYAKYLN |
Full Sequence |
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Protein Sequence Length: 560 Download |
MVVLISSNLQ AAHFNLNPNL RPRRSTIRCG IAEPSGEPAP VGQKTKYNDG FFEKAFMTLF 60 ARKMENFASP AAKASRNGAV SSKGWLDYNY DSFVDASKKV MQGRNRLQQQ QVVREVLLSM 120 LPPGAPDQFR KLFPPTRWAA EFNAALTVPF FQWLVGPSEV IEVEINGVKQ RSGVRIKKCR 180 YLENSGCVGM CVNMCKIPTQ DFFTNEFGLP LTMNPNFEDM SCEMIYGQAP PSFEEDPVAK 240 QPCFPNICIQ PRGLLRRLEK SILFFKGQRS GRLPSDQRLT WRGDSGLSDG FAYHVDLVGG 300 YYDAGDNVKF GLPMAFTTTL LSWSVIEFGS SMGDEIENAK SAIRWSADYL LKAATATPDT 360 LYVQPNMDHR CWERPEDMDT PRTVYRVEPQ NPGSDVAAET AAALAAASLV FKESDPRYSS 420 KLLGTSVKVF SFADMYRGSY SDFLGSVVCP FYCSYSGYHD ELLWGASWLH KASQNVTYLS 480 YIQSNGHTLG AEDDDFSFSW DDKRPGTKVL LSKELPTFQA QYTPGGLLYK GTESNLQNVT 540 STTFLLLTYA KYLNSTGGG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02175 | PLN02175 | 2.0e-122 | 258 | 556 | 328 | + endoglucanase | ||
PLN03009 | PLN03009 | 1.0e-123 | 258 | 557 | 332 | + cellulase | ||
PLN02308 | PLN02308 | 3.0e-133 | 258 | 558 | 330 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 1.0e-138 | 258 | 558 | 335 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 2.0e-159 | 258 | 555 | 327 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA06877.1 | 0 | 258 | 558 | 37 | 366 | cellulase precursor [Populus alba] |
DDBJ | BAA77239.1 | 0 | 258 | 558 | 37 | 366 | endo-1,4-beta glucanase [Populus alba] |
DDBJ | BAB39482.1 | 0 | 258 | 558 | 37 | 366 | endo-1,4-beta glucanase [Populus alba] |
EMBL | CBI34594.1 | 0 | 258 | 558 | 37 | 366 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002299423.1 | 0 | 258 | 558 | 37 | 366 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 258 | 551 | 9 | 319 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ksc_A | 0 | 258 | 551 | 9 | 319 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ks8_A | 0 | 258 | 551 | 9 | 319 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 258 | 554 | 10 | 334 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 258 | 554 | 10 | 334 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV466663 | 278 | 256 | 530 | 0 |
GR999427 | 259 | 258 | 513 | 0 |
DT574316 | 281 | 258 | 535 | 0 |
DV700301 | 285 | 271 | 526 | 0 |
DV465018 | 244 | 258 | 498 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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