Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10017344 |
Family | GH17 |
Protein Properties | Length: 388 Molecular Weight: 41618.6 Isoelectric Point: 8.0443 |
Chromosome | Chromosome/Scaffold: 511 Start: 200948 End: 202111 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 2 | 318 | 0 |
GINYGQIANNLPSPQDAVPLIKALGATKVKLYDASPQILRAFSHSNIEFIIGLGNEYLSKMAADQNAAVSWVKSNVQTYLPATNITYIAVGNEVLTLSDE SFIPFLVPALQSILSAVVSLNLQKQVTVTTPHSLAVLQTSYPPSSGTFRRDLIGCISKILDFNAKTNSPFLINAYPYFAYKANPKQVSLDFVLFQPNQGI IDPVSNLHYDNMLFAQIDAVHFALASLGYKDMPVHISETGWPSKGDDDEAGATPENAKKYNGNLIKTICQRKGTPARPNLDLNIYVFALFNENMKPGPTS ERNYGLFKPDGTPAYSI |
Full Sequence |
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Protein Sequence Length: 388 Download |
MGINYGQIAN NLPSPQDAVP LIKALGATKV KLYDASPQIL RAFSHSNIEF IIGLGNEYLS 60 KMAADQNAAV SWVKSNVQTY LPATNITYIA VGNEVLTLSD ESFIPFLVPA LQSILSAVVS 120 LNLQKQVTVT TPHSLAVLQT SYPPSSGTFR RDLIGCISKI LDFNAKTNSP FLINAYPYFA 180 YKANPKQVSL DFVLFQPNQG IIDPVSNLHY DNMLFAQIDA VHFALASLGY KDMPVHISET 240 GWPSKGDDDE AGATPENAKK YNGNLIKTIC QRKGTPARPN LDLNIYVFAL FNENMKPGPT 300 SERNYGLFKP DGTPAYSIGI DLPAGNSNRS SPAAPTAHSP PSSAGVSPPV GYLAITGGAG 360 RIKVSFLSSS VGILVMLVQL SFMADRC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0004 | 234 | 297 | 65 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-100 | 2 | 318 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PIR | 0 | 1 | 327 | 32 | 355 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
RefSeq | XP_002278950.1 | 0 | 7 | 384 | 33 | 400 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 1 | 320 | 15 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317055.1 | 0 | 1 | 320 | 5 | 323 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 1 | 356 | 26 | 379 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 318 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 1 | 318 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 1 | 318 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 1 | 322 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 1 | 322 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK272869 | 307 | 5 | 311 | 0 |
DY982770 | 304 | 1 | 304 | 0 |
DY296216 | 327 | 1 | 326 | 0 |
EX658320 | 286 | 30 | 315 | 0 |
CK277531 | 288 | 1 | 288 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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