Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10017375 |
Family | CE8 |
Protein Properties | Length: 446 Molecular Weight: 49258 Isoelectric Point: 6.6897 |
Chromosome | Chromosome/Scaffold: 511 Start: 318036 End: 321179 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 83 | 378 | 0 |
AVVAKDGSGNFTDIMDAVAAAPDYSMKRYVVYIKAGVYQEYVEIKKKKWNLMMIGDGMNRTVITGNRNFIDGWTTFRTATFAVSGRGFIARDLTIENSAG PEKHQAVALRSDSDLSVYYRIEVRGYQDTLYTHTMRQFYRDSVIKGTVDFIFGNAAAVFQNCSLLARKGLDNQKNTITAHGKKDPNQSTGYSIQFCNIGA DSDLAPYGNSSYTYLGRPWKNFSTTVVMQSYIGEAVRPEGWLEWNGPMFLDTLYYGEFMNYGPGAGMGRRVTWPGYHALNSSSAAANFTVGQFIEG |
Full Sequence |
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Protein Sequence Length: 446 Download |
MTNPDTCIEG FEGTNSILKS LVAGGLSDIT SSVQQLLTDV DSPKNKPAGS NSNSGGDKFP 60 SWVQRQDRRK LLALAVNGLT VDAVVAKDGS GNFTDIMDAV AAAPDYSMKR YVVYIKAGVY 120 QEYVEIKKKK WNLMMIGDGM NRTVITGNRN FIDGWTTFRT ATFAVSGRGF IARDLTIENS 180 AGPEKHQAVA LRSDSDLSVY YRIEVRGYQD TLYTHTMRQF YRDSVIKGTV DFIFGNAAAV 240 FQNCSLLARK GLDNQKNTIT AHGKKDPNQS TGYSIQFCNI GADSDLAPYG NSSYTYLGRP 300 WKNFSTTVVM QSYIGEAVRP EGWLEWNGPM FLDTLYYGEF MNYGPGAGMG RRVTWPGYHA 360 LNSSSAAANF TVGQFIEGNL WLGSDGGRYN GRGLFFFGAA VDRKRFGDSK EAFDKEMGGH 420 VMEAATVDDR EEDVRERESN KNEER* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 2.0e-156 | 1 | 386 | 398 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 4.0e-158 | 1 | 389 | 393 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-160 | 1 | 389 | 391 | + pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 1 | 389 | 397 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 82 | 379 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 1 | 389 | 132 | 522 | unknown [Populus trichocarpa] |
DDBJ | BAF42041.1 | 0 | 1 | 389 | 124 | 503 | pectin methylesterase 4 [Pyrus communis] |
EMBL | CBI29628.1 | 0 | 1 | 391 | 131 | 523 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | Q43062 | 0 | 1 | 392 | 136 | 519 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 1 | 389 | 124 | 514 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 79 | 389 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 82 | 382 | 8 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 2e-23 | 80 | 306 | 3 | 250 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-23 | 80 | 306 | 3 | 250 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-23 | 80 | 306 | 3 | 250 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CV233766 | 267 | 123 | 389 | 0 |
DY290214 | 380 | 11 | 377 | 0 |
EX673765 | 289 | 106 | 392 | 0 |
DT605043 | 270 | 113 | 382 | 0 |
DR937739 | 279 | 111 | 389 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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