| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10017663 |
| Family | GT30 |
| Protein Properties | Length: 94 Molecular Weight: 10351.1 Isoelectric Point: 4.8344 |
| Chromosome | Chromosome/Scaffold: 765 Start: 422573 End: 423102 |
| Description | KDO transferase A |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT30 | 1 | 85 | 5.5e-29 |
| MAAIPVIKQCVHRRPDLNVLMTTTTASAFKVIENDIPDGVLYQFCPVDTPSAMDAFLSYWKSTAIILLESELWPNLIMVSSAMGV | |||
| Full Sequence |
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| Protein Sequence Length: 94 Download |
| MAAIPVIKQC VHRRPDLNVL MTTTTASAFK VIENDIPDGV LYQFCPVDTP SAMDAFLSYW 60 KSTAIILLES ELWPNLIMVS SAMGVGYPPF HTY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1519 | KdtA | 5.0e-19 | 1 | 85 | 85 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK05749 | PRK05749 | 2.0e-21 | 1 | 85 | 85 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | ||
| pfam04413 | Glycos_transf_N | 1.0e-25 | 1 | 85 | 85 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016740 | transferase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB08602.1 | 6e-29 | 1 | 83 | 68 | 150 | 3-deoxy-D-manno-octulosonic acid transferase-like protein [Arabidopsis thaliana] |
| EMBL | CBI30224.1 | 1e-31 | 1 | 85 | 70 | 154 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277784.1 | 1e-31 | 1 | 85 | 70 | 154 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322900.1 | 2e-35 | 1 | 85 | 72 | 156 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528642.1 | 9e-35 | 1 | 85 | 74 | 158 | 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EG678075 | 85 | 1 | 85 | 1e-35 |
| EY785179 | 87 | 1 | 87 | 9e-35 |
| CX051433 | 85 | 1 | 85 | 1e-34 |
| FC903257 | 85 | 1 | 85 | 3e-34 |
| FC905948 | 85 | 1 | 85 | 3e-34 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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