| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10017740 |
| Family | CBM43 |
| Protein Properties | Length: 516 Molecular Weight: 57234.4 Isoelectric Point: 4.8083 |
| Chromosome | Chromosome/Scaffold: 212 Start: 176451 End: 178303 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 396 | 477 | 1.6e-26 |
| WCVLDPNAVTDLTELSKSMDYACGLADCTALEYGCSCNHLSVTGNASYAFNMYYQVQGQKDWSCDFSGLGVVTDENPSDEKC | |||
| GH17 | 38 | 373 | 0 |
| VGVNWGTMSTHQLPPDRVVQMLTDNNFAKLKLFEFDDVIMTALLDTHIEVMLAIPNYMLRTMAEDFDSASAWVDQNVTDWCFHGGVNVKLSLTFFLQLLW YVAVGNEPFLQTYNGSFDKYTLPALKNIQNALNKAGIGEKVKATVPFNADVYNSPAMSTIPLTLTQSLQQGISGLKSRTSHSKSSNSLMKMMPHSLLYGN MYFPMDYAFFDGTNKPIKDGDLLYTNVFDANFDTLVWSLVKSGYPDMRIMVGEVGWPTDGDLHATIENAKRFNQGLLKHVVDGNGTPARQAGSDDDKIEV YLFSLIDENAKSVAPGKFERHWGIFEYDGRPKYELD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 516 Download |
| MEGSTPLLLY FFFFLFLLDG TSAAAAGGGR VRGRGSNVGV NWGTMSTHQL PPDRVVQMLT 60 DNNFAKLKLF EFDDVIMTAL LDTHIEVMLA IPNYMLRTMA EDFDSASAWV DQNVTDWCFH 120 GGVNVKLSLT FFLQLLWYVA VGNEPFLQTY NGSFDKYTLP ALKNIQNALN KAGIGEKVKA 180 TVPFNADVYN SPAMSTIPLT LTQSLQQGIS GLKSRTSHSK SSNSLMKMMP HSLLYGNMYF 240 PMDYAFFDGT NKPIKDGDLL YTNVFDANFD TLVWSLVKSG YPDMRIMVGE VGWPTDGDLH 300 ATIENAKRFN QGLLKHVVDG NGTPARQAGS DDDKIEVYLF SLIDENAKSV APGKFERHWG 360 IFEYDGRPKY ELDLKGYGSD VGLVAVDGVL YMERKWCVLD PNAVTDLTEL SKSMDYACGL 420 ADCTALEYGC SCNHLSVTGN ASYAFNMYYQ VQGQKDWSCD FSGLGVVTDE NPSDEKCLFP 480 VMIANGASSV QGGIKFLLRR IWLVIVLMIM MFPYM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 286 | 365 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-18 | 395 | 466 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-32 | 395 | 479 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-51 | 51 | 373 | 327 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28113.1 | 0 | 3 | 511 | 520 | 975 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189076.1 | 0 | 36 | 511 | 37 | 497 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002281500.1 | 0 | 3 | 509 | 2 | 485 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324967.1 | 0 | 36 | 490 | 7 | 446 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515573.1 | 0 | 34 | 511 | 26 | 489 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 1e-36 | 38 | 374 | 3 | 314 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 3ur8_A | 1e-36 | 38 | 374 | 3 | 314 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 3ur7_B | 1e-36 | 38 | 374 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 1e-36 | 38 | 374 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 2cyg_A | 7e-36 | 38 | 374 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
