| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10017820 |
| Family | GH14 |
| Protein Properties | Length: 481 Molecular Weight: 54037.6 Isoelectric Point: 6.6163 |
| Chromosome | Chromosome/Scaffold: 14 Start: 642724 End: 645352 |
| Description | beta-amylase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 167 | 465 | 0 |
| QNLSWGIDRERVLRGLTAVEVYDYMISFWVEFDEFFEDGIISLIEIGLGPCGELRYPSNPVKHGWRYPGIGEFQCYDQYMMRNLRKAAEARGHSFWARGP DNSGSYNSRPHETGFFCGGGDYDGCHGGSFLNWYSRVLVDHGDLVLSLAKLAFEGTCITAKLPSIHWWYKTASHAAELTAGIYNSCNRDGYAAITAMLMK HGIALNICFSDFGMLNQPVDFAEGCADRDGLFWQVLNAAWDVSIQIGSEGSFLSHDRVAYNKLLDKCETIERSRRRHSLSFTYQRLSVALMDRHNLLKF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 481 Download |
| MDYDSGQLKS VFVPTPPPYD LSAGNVEDVD QARIIPLVLC PAITINDKQI PDVQAKLSER 60 DFAGSAYVSV YVMLPVTGCN NMKCELADPD GLLQQLRALK SADVDGVKID CWWGIVSAHA 120 PQEYNWHGYK KLCQILRELK LSYRGVLKSV GVILTYFSMI KKEGVTQNLS WGIDRERVLR 180 GLTAVEVYDY MISFWVEFDE FFEDGIISLI EIGLGPCGEL RYPSNPVKHG WRYPGIGEFQ 240 CYDQYMMRNL RKAAEARGHS FWARGPDNSG SYNSRPHETG FFCGGGDYDG CHGGSFLNWY 300 SRVLVDHGDL VLSLAKLAFE GTCITAKLPS IHWWYKTASH AAELTAGIYN SCNRDGYAAI 360 TAMLMKHGIA LNICFSDFGM LNQPVDFAEG CADRDGLFWQ VLNAAWDVSI QIGSEGSFLS 420 HDRVAYNKLL DKCETIERSR RRHSLSFTYQ RLSVALMDRH NLLKFESFVK RMHGKPPAYP 480 * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 5.0e-77 | 68 | 477 | 443 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 2.0e-91 | 68 | 480 | 447 | + beta-amylase | ||
| PLN02801 | PLN02801 | 3.0e-103 | 67 | 473 | 439 | + beta-amylase | ||
| PLN02705 | PLN02705 | 5.0e-150 | 47 | 475 | 453 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 1 | 475 | 507 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40368.1 | 0 | 1 | 475 | 145 | 650 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI40370.1 | 0 | 41 | 475 | 84 | 541 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273843.1 | 0 | 1 | 475 | 187 | 692 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511857.1 | 0 | 1 | 475 | 192 | 697 | Beta-amylase, putative [Ricinus communis] |
| RefSeq | XP_002511858.1 | 0 | 44 | 474 | 80 | 533 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1q6d_A | 0 | 67 | 474 | 11 | 443 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1wdq_A | 0 | 67 | 474 | 11 | 443 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1wds_A | 0 | 67 | 474 | 11 | 443 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1wdp_A | 0 | 67 | 474 | 11 | 443 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1q6c_A | 0 | 67 | 474 | 11 | 443 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GE635393 | 252 | 206 | 457 | 0 |
| DV466053 | 271 | 205 | 475 | 0 |
| GR992227 | 260 | 205 | 464 | 0 |
| EE064326 | 245 | 188 | 432 | 0 |
| GR983614 | 256 | 203 | 458 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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