Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10018102 |
Family | GH3 |
Protein Properties | Length: 533 Molecular Weight: 58092.6 Isoelectric Point: 9.0466 |
Chromosome | Chromosome/Scaffold: 112 Start: 77031 End: 80393 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 47 | 281 | 0 |
LSTPLAIPMLYGIDAVHGHNYAYKAPIFPHNIGLGVTRDSDLVKRIGAATAAEIRATGVHYAFSPTIVVCRDPRWGRCFESYSEDPSIVTQMTEIIPGLQ GEIPPNSNHGVPFVNARDKTKMAACAKHYVGDGGTVKGIDRNNTVIPWDGLMKTHMLPYLDAIYKGVSTVMVSYSSWNGKKMHANRKLITSFLKNKLKFR GFVVSDWLGVERITTPEHANYSNSIQAALKAGIDM |
Full Sequence |
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Protein Sequence Length: 533 Download |
MLSLAGSMVN VFTTVPDILP TKPQPAHNNI TVGRWVYSIN KIQNAALSTP LAIPMLYGID 60 AVHGHNYAYK APIFPHNIGL GVTRDSDLVK RIGAATAAEI RATGVHYAFS PTIVVCRDPR 120 WGRCFESYSE DPSIVTQMTE IIPGLQGEIP PNSNHGVPFV NARDKTKMAA CAKHYVGDGG 180 TVKGIDRNNT VIPWDGLMKT HMLPYLDAIY KGVSTVMVSY SSWNGKKMHA NRKLITSFLK 240 NKLKFRGFVV SDWLGVERIT TPEHANYSNS IQAALKAGID MGIHQGPHIQ SRESHNPMST 300 IDDAVSRILR VKFTMGLFET PLADHTMASE LGKKEHRELA REAVRKSLVL LKNGKSGEEP 360 LLPLQKKGAP KILVAGSHAH NLGLQCGGWT ITWQGQFGNN LTTVTTILEG VSNTVDPSTE 420 VVYKESPNVN FTTSNNFSYG IVSFLETGQP AVIQPHVANI DALVAAWLPG TEGCQGVADV 480 LFGDYGFTGQ LARTWFKSVD QLPVEKSRIV AISFALISFQ VISFHLNHIS AC* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 6.0e-9 | 441 | 504 | 64 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 8.0e-30 | 39 | 390 | 390 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 3.0e-50 | 39 | 466 | 451 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 3.0e-75 | 35 | 311 | 288 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-78 | 39 | 417 | 393 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 35 | 504 | 91 | 601 | unknown [Populus trichocarpa] |
RefSeq | XP_002266470.1 | 0 | 35 | 504 | 93 | 603 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 35 | 504 | 68 | 578 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 35 | 504 | 83 | 588 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 35 | 504 | 97 | 608 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 31 | 504 | 66 | 580 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
PDB | 1x38_A | 0 | 31 | 504 | 66 | 580 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
PDB | 1lq2_A | 0 | 31 | 504 | 66 | 580 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 31 | 504 | 66 | 580 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 31 | 504 | 66 | 580 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO784016 | 412 | 35 | 438 | 0 |
DT559348 | 307 | 95 | 393 | 0 |
FN998760 | 301 | 57 | 349 | 0 |
EX268512 | 341 | 78 | 409 | 0 |
DY668382 | 318 | 130 | 439 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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