Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10018103 |
Family | CE8 |
Protein Properties | Length: 617 Molecular Weight: 67204.9 Isoelectric Point: 8.3603 |
Chromosome | Chromosome/Scaffold: 112 Start: 84236 End: 87564 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 302 | 597 | 0 |
DIIVSADGNGTFKTIGEAIKKAPELSNRRTVIYVRAGRYEENNLKVGRKKWNLMFIGDGKGKTVITGKKSVFDKLTTFHTASFAATGAGFIARDMTFENT AGPAKHQAVALRIGADHAVIYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFVFGNAAVVLQNCSFYARKPMDMQKNTVTAQNRKDPNQNTGISIHASRI LATPDLQASKGSFQTYLGRPWKLYSRTVVMVTYIGDHVHPKGWLEWNATFALDTLYYGEYMNYGPGAGVGQRVTWPGYRVIKSTVEASRFTVGQFI |
Full Sequence |
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Protein Sequence Length: 617 Download |
MDRVKLDYGR LAPPDHTTSG PTTASGTTTA SHHPPPPSTR KRKLIILSLL SLSLIIASAI 60 SAAFLVTSRS RGTGHLDPTR HRRPSQAISR TCTKTRYPTL CLNSLTEFPG SLTANEDDLV 120 HISFNMTLQH LNRALYLSSS MSSSLPTDDE LPDELARSAY DDCLELLDDS IDALSQSLSA 180 VGGGSGGGGS ATTTDVSTWL SAALTNQDTC AEGLADVKPG AAKMEMERKL KDLTELISNC 240 LSIFSATDNG DFAGVPIQNR RLLESATAAE EEEEEGEVEF PNWVGRKERR LLSLPPSAIK 300 ADIIVSADGN GTFKTIGEAI KKAPELSNRR TVIYVRAGRY EENNLKVGRK KWNLMFIGDG 360 KGKTVITGKK SVFDKLTTFH TASFAATGAG FIARDMTFEN TAGPAKHQAV ALRIGADHAV 420 IYRCNVIGYQ DTLYVHSNRQ FYRECDIYGT VDFVFGNAAV VLQNCSFYAR KPMDMQKNTV 480 TAQNRKDPNQ NTGISIHASR ILATPDLQAS KGSFQTYLGR PWKLYSRTVV MVTYIGDHVH 540 PKGWLEWNAT FALDTLYYGE YMNYGPGAGV GQRVTWPGYR VIKSTVEASR FTVGQFIFGS 600 SWLPSTGVAF LSGLST* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 9.0e-165 | 84 | 614 | 543 | + pectinesterase | ||
PLN02201 | PLN02201 | 8.0e-169 | 158 | 614 | 459 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 69 | 615 | 549 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 302 | 600 | 299 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 65 | 614 | 555 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42038.1 | 0 | 81 | 616 | 82 | 617 | pectin methylesterase 1 [Pyrus communis] |
RefSeq | NP_190491.1 | 0 | 78 | 615 | 77 | 597 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002278061.1 | 0 | 77 | 615 | 65 | 596 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
RefSeq | XP_002317777.1 | 0 | 69 | 614 | 16 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321999.1 | 0 | 6 | 615 | 1 | 604 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 297 | 614 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 299 | 614 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 7e-21 | 306 | 572 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-21 | 306 | 572 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-20 | 306 | 572 | 12 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |