Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10018116 |
Family | GT5 |
Protein Properties | Length: 672 Molecular Weight: 73909.6 Isoelectric Point: 6.5104 |
Chromosome | Chromosome/Scaffold: 112 Start: 181637 End: 186372 |
Description | Glycogen/starch synthases, ADP-glucose type |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 136 | 631 | 0 |
IVFVSSEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVTPRYMHSPESKTYASALDADCRIKISCFGAEQEVAFFHEYRDKVDWIFVDHPSYHRPGNPYG DTKGAFGDNQFRFALLCYAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVPVLLAAKYRPYGVYKDARCILVIHNLAHQGVEPASTYGNLGLSPEWYGAL GWVFPTWARTHPLDTGEAINMLKGAIVTSDRILTVSKGYAWEITTVEGGYGLQELLSSRRVVLNGITNGIDICEWDPSSDKFTESHYSADDLSGKVQCKM ALQKELGLPVRPECPLIGFIGRLDYQKGIDIIRWAIPELLQDDVQFVMLGSGDPLYENWMREAEAVYKDKFRGWVGFNVPISHRITAGADILLMPSRFEP CGLNQLYAMRYGTVPVVHGTGGLRDTVQTFDPFAQEGKGDGTGWTFAPLTKDSMLSALRTAVETYRDHKSSWEGIMKRGMEKDYTWENAATQYEQK |
Full Sequence |
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Protein Sequence Length: 672 Download |
METLSLRHCV HQSFSKSEPV KSTRGSTRPV LGFAHFSRTS NARFRSVAAA SGKDSSSPPS 60 ILPDNQKKED DAAKKGFLLG AETDASGSVV GFNLTSHSLA GDAASQPSVK KIAEKVEEIA 120 DTEGTEEALT KVIHSIVFVS SEAAPYSKTG GLGDVCGSLP IALAARGHRV MVVTPRYMHS 180 PESKTYASAL DADCRIKISC FGAEQEVAFF HEYRDKVDWI FVDHPSYHRP GNPYGDTKGA 240 FGDNQFRFAL LCYAACEAPL VLPLGGFTYG EKCLFLVNDW HASLVPVLLA AKYRPYGVYK 300 DARCILVIHN LAHQGVEPAS TYGNLGLSPE WYGALGWVFP TWARTHPLDT GEAINMLKGA 360 IVTSDRILTV SKGYAWEITT VEGGYGLQEL LSSRRVVLNG ITNGIDICEW DPSSDKFTES 420 HYSADDLSGK VQCKMALQKE LGLPVRPECP LIGFIGRLDY QKGIDIIRWA IPELLQDDVQ 480 FVMLGSGDPL YENWMREAEA VYKDKFRGWV GFNVPISHRI TAGADILLMP SRFEPCGLNQ 540 LYAMRYGTVP VVHGTGGLRD TVQTFDPFAQ EGKGDGTGWT FAPLTKDSML SALRTAVETY 600 RDHKSSWEGI MKRGMEKDYT WENAATQYEQ KHENGKTEAH CEAERRKRNE NDTSLEAAAE 660 GKKSVFVLTR P* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-103 | 135 | 630 | 512 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 6.0e-149 | 136 | 629 | 500 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 1.0e-176 | 136 | 630 | 501 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 136 | 634 | 500 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 0 | 136 | 630 | 496 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV25893.1 | 0 | 70 | 633 | 61 | 623 | starch synthase isoform I [Manihot esculenta] |
DDBJ | BAD18845.1 | 0 | 1 | 630 | 1 | 633 | starch synthase I precursor [Phaseolus vulgaris] |
RefSeq | NP_197818.1 | 0 | 28 | 630 | 25 | 639 | SSI1 (SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1); starch synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
Swiss-Prot | P93568 | 0 | 20 | 630 | 23 | 628 | SSY1_SOLTU RecName: Full=Soluble starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Soluble starch synthase I; Short=SS I; Flags: Precursor |
RefSeq | XP_002321996.1 | 0 | 12 | 633 | 16 | 639 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 135 | 630 | 11 | 506 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3vue_A | 0 | 135 | 630 | 11 | 506 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 135 | 632 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 135 | 638 | 2 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 135 | 638 | 2 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO595058 | 483 | 151 | 633 | 0 |
HO581986 | 368 | 243 | 609 | 0 |
GO872237 | 340 | 294 | 633 | 0 |
GO842198 | 335 | 158 | 492 | 0 |
EX370286 | 315 | 292 | 606 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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