Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10018365 |
Family | GH16 |
Protein Properties | Length: 498 Molecular Weight: 56896.5 Isoelectric Point: 8.4992 |
Chromosome | Chromosome/Scaffold: 251 Start: 94809 End: 98892 |
Description | xyloglucan endotransglucosylase/hydrolase 8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH16 | 52 | 216 | 1.2e-22 |
EDGQIWYLSMDKDTGCGFQTKEMYRFGWFSMKLKLVGGDSAGVVTAYYMCTENGAGPTRDEIDFEFLGNRTGQPYLIQTNIYKNGTGNREMRHELWFDPT EDFHSYSVLWNDHQLVFFVDRVPIRVMKNNGKSNNFFPNEKPMYLFSSIWNADDWATRGGLEKTD |
Full Sequence |
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Protein Sequence Length: 498 Download |
MATTSLPPAA TSAAILVIAA AVMAATTSAL SKGAFEDNFN IMWSKEHFTT SEDGQIWYLS 60 MDKDTGCGFQ TKEMYRFGWF SMKLKLVGGD SAGVVTAYYM CTENGAGPTR DEIDFEFLGN 120 RTGQPYLIQT NIYKNGTGNR EMRHELWFDP TEDFHSYSVL WNDHQLVFFV DRVPIRVMKN 180 NGKSNNFFPN EKPMYLFSSI WNADDWATRG GLEKTDWKKS PFVSAYKDFS VEGCQWEDPY 240 PKCVSTTTEN WWDQKDAWYL SDSQKLDFAW VERNMVIYDY CKDTERFPTL PEECSLSPWE 300 VDPSADACWS TSRTRKSIIH SDIKLVAEYR EFCSGMIRIW GLNSHLCSRF TEIASIVANC 360 NGKSLNKSKI NRRSSHLRRR SDQKSRSRLR EESGKKAQLN TMVCAKCEKK LAKVIVPDKW 420 KEGASNTNES GGRKINENKL LSKKNRWTPY GVTKCMICKQ QVHQDGKYCH TCAYTKGVCA 480 MCGKQVLDTK IYKQSNV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd02183 | GH16_fungal_CRH1_transglycosylase | 1.0e-21 | 77 | 232 | 169 | + glycosylphosphatidylinositol-glucanosyltransferase. Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues. | ||
pfam10235 | Cript | 3.0e-36 | 413 | 497 | 88 | + Microtubule-associated protein CRIPT. The CRIPT protein is a cytoskeletal protein involved in microtubule production. The C-terminal domain is essential for binding to the PDZ3 domain of the SAP90 protein, one of a super-family of PDZ-containing proteins that play an important role in coupling the membrane ion channels with their signalling partners. SAP90 is concentrated in the post synaptic density of glutamatergic neurons. | ||
pfam00722 | Glyco_hydro_16 | 3.0e-70 | 35 | 219 | 186 | + Glycosyl hydrolases family 16. | ||
PLN03161 | PLN03161 | 3.0e-86 | 35 | 295 | 264 | + Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional | ||
cd02176 | GH16_XET | 8.0e-150 | 32 | 294 | 263 | + Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16. Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005618 | cell wall |
GO:0005975 | carbohydrate metabolic process |
GO:0006073 | cellular glucan metabolic process |
GO:0016762 | xyloglucan:xyloglucosyl transferase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95902.1 | 0 | 24 | 300 | 17 | 293 | unknown [Populus trichocarpa] |
GenBank | ACD03227.1 | 0 | 10 | 300 | 5 | 300 | xyloglucan endotransglucosylase/hydrolase 3 [Malus x domestica] |
GenBank | ACU21152.1 | 0 | 17 | 300 | 19 | 302 | unknown [Glycine max] |
RefSeq | XP_002304928.1 | 0 | 24 | 299 | 19 | 294 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518528.1 | 0 | 7 | 300 | 7 | 300 | Xyloglucan endotransglucosylase/hydrolase protein A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1un1_B | 0 | 25 | 294 | 4 | 272 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1un1_A | 0 | 25 | 294 | 4 | 272 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1umz_B | 0 | 25 | 294 | 4 | 272 | A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. |
PDB | 1umz_A | 0 | 25 | 294 | 4 | 272 | A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg. |
PDB | 2uwb_B | 0 | 27 | 294 | 12 | 267 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |