| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10018491 |
| Family | GH14 |
| Protein Properties | Length: 570 Molecular Weight: 64230.8 Isoelectric Point: 5.243 |
| Chromosome | Chromosome/Scaffold: 1308 Start: 2628 End: 6021 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 74 | 491 | 0 |
| ELGVVTPDNVFENKDVVEKQLKELKSAGIDGIMIDVWWGIIEAKGPKQYDWSGYKELFELLKALDLKIQAIMSFHQCGGNVGDNVFIPLPDWVLEVGEVD PDVFYTNRAGVRNKEYLSLGVDRLPLFGGRSPVQIYGDYMKSFRETMADFFDSGLIIDIEVGLGPAGELRYPSYPETQGWVFPGIGEFQCYDKYLAAEFK KEAIEAGHPEWELPDDAGEYNNTPDQTGFFKSNGSYLSEKGKFFLMWYSNKLIIHGDDILDEANKAFLGCKVKLAAKVSGIHWWYTDPSHAAELTAGYYN LKERDGYRPVARMMSRHHGLVNFTCLEMRNTEQPAAAKSAPQQLVQQVLSDAWTEGIDVAGENALARYDAEGYNQILLNARPNGVRPPKDGEKKLQMYGV TILRLTDDLLEQKNLDVF | |||
| Full Sequence |
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| Protein Sequence Length: 570 Download |
| MTTVMQCNNN HHRQSQFPPA AAKRGTGWLS QEKASDRGFR QRRRRMNGVN YSSGGGADQV 60 VLTREITSTA EVAELGVVTP DNVFENKDVV EKQLKELKSA GIDGIMIDVW WGIIEAKGPK 120 QYDWSGYKEL FELLKALDLK IQAIMSFHQC GGNVGDNVFI PLPDWVLEVG EVDPDVFYTN 180 RAGVRNKEYL SLGVDRLPLF GGRSPVQIYG DYMKSFRETM ADFFDSGLII DIEVGLGPAG 240 ELRYPSYPET QGWVFPGIGE FQCYDKYLAA EFKKEAIEAG HPEWELPDDA GEYNNTPDQT 300 GFFKSNGSYL SEKGKFFLMW YSNKLIIHGD DILDEANKAF LGCKVKLAAK VSGIHWWYTD 360 PSHAAELTAG YYNLKERDGY RPVARMMSRH HGLVNFTCLE MRNTEQPAAA KSAPQQLVQQ 420 VLSDAWTEGI DVAGENALAR YDAEGYNQIL LNARPNGVRP PKDGEKKLQM YGVTILRLTD 480 DLLEQKNLDV FKKFVRRMHA NQDYCGDSSK YGHEIGVLER SKGKLGIEEL MEATKPIEPF 540 PWDEETDMPV EPVGLFGKLL QKLFSLFFR* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 3.0e-129 | 90 | 455 | 369 | + beta-amylase | ||
| PLN02905 | PLN02905 | 4.0e-153 | 75 | 499 | 429 | + beta-amylase | ||
| PLN00197 | PLN00197 | 7.0e-154 | 75 | 503 | 433 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 2.0e-169 | 75 | 498 | 427 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 75 | 568 | 496 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK30294.1 | 0 | 75 | 567 | 25 | 513 | AF353207_1 beta-amylase [Castanea crenata] |
| DDBJ | BAA09462.1 | 0 | 75 | 551 | 21 | 495 | beta-amylase [Glycine max] |
| Swiss-Prot | O22585 | 0 | 75 | 551 | 21 | 495 | AMYB_MEDSA RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
| RefSeq | XP_002327920.1 | 0 | 75 | 569 | 24 | 519 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515712.1 | 0 | 75 | 569 | 24 | 518 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uko_D | 0 | 75 | 551 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 75 | 551 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_B | 0 | 75 | 551 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_A | 0 | 75 | 551 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_D | 0 | 75 | 551 | 20 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 469 | 83 | 551 | 0 |
| HO803971 | 398 | 145 | 542 | 0 |
| HO782669 | 387 | 162 | 548 | 0 |
| JG213165 | 261 | 310 | 570 | 0 |
| GT625519 | 283 | 144 | 426 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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