| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10018598 |
| Family | GH5 |
| Protein Properties | Length: 433 Molecular Weight: 49758.8 Isoelectric Point: 8.1367 |
| Chromosome | Chromosome/Scaffold: 1308 Start: 493268 End: 495386 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 52 | 383 | 4.4e-35 |
| DGRPFYVNGWNSYWLMEHSADDQRRHKTIRMLQVGSKMGLTVCRTWAFNDGGRDALQVSPGQFEERVFKALDHVIAEARAHKVRLILSLVNNLKAYGGKD RYVRWAWEEGIGLSASNDSFFYDPSIKKYFKHYLQTVLTRKNTVTGVEYRNDPTIFAWELMNEPRCMTDPSGDTLQDWTEEMSAFVKSIDNNHLLTVGLE GFYGPKNPKRLTVNPANWAEELGSDFIRNSKVVHLDFASVHIYPDHWVAHQSFEDKLIFVSKWMRSHIEDGHKELNKPVLFTEFGLSNMNKDFQPSQRDW LYKTVYDIIYKSAKRKHSGAGAMMWQLFVNDM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 433 Download |
| MGGTAPCIPI LGVASCVIFI YLSFGNTWPI GFLPKAPAWS FVKRNGTGFV LDGRPFYVNG 60 WNSYWLMEHS ADDQRRHKTI RMLQVGSKMG LTVCRTWAFN DGGRDALQVS PGQFEERVFK 120 ALDHVIAEAR AHKVRLILSL VNNLKAYGGK DRYVRWAWEE GIGLSASNDS FFYDPSIKKY 180 FKHYLQTVLT RKNTVTGVEY RNDPTIFAWE LMNEPRCMTD PSGDTLQDWT EEMSAFVKSI 240 DNNHLLTVGL EGFYGPKNPK RLTVNPANWA EELGSDFIRN SKVVHLDFAS VHIYPDHWVA 300 HQSFEDKLIF VSKWMRSHIE DGHKELNKPV LFTEFGLSNM NKDFQPSQRD WLYKTVYDII 360 YKSAKRKHSG AGAMMWQLFV NDMEDSNDDF GIMPWERASM YKLITEQSCK LAKLRGAIDE 420 NWNMKELCLP KQ* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.0007 | 199 | 294 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 1.0e-9 | 168 | 352 | 187 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 4.0e-29 | 81 | 393 | 314 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95966.1 | 0 | 1 | 432 | 5 | 435 | unknown [Populus trichocarpa] |
| GenBank | ACN78665.1 | 0 | 1 | 432 | 14 | 443 | endo-beta-mannanase [Malus x domestica] |
| RefSeq | NP_179660.2 | 0 | 3 | 428 | 6 | 429 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330687.1 | 0 | 1 | 432 | 5 | 435 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517909.1 | 0 | 9 | 432 | 10 | 431 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 40 | 414 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 50 | 415 | 21 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 50 | 415 | 21 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 50 | 415 | 21 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 50 | 415 | 21 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
