| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10018842 |
| Family | GH14 |
| Protein Properties | Length: 737 Molecular Weight: 82266.5 Isoelectric Point: 5.3501 |
| Chromosome | Chromosome/Scaffold: 103 Start: 134913 End: 139127 |
| Description | beta-amylase 7 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 376 | 721 | 0 |
| VVIMSFHECGGNVGDDVCIPLPHWIAEIGRSNPDIFFTDKEGRRNPECLSWGIDRERVLRGRTAVEVYFDYMRSFRVEFDEFFEDGIISLVEIGLGPCGE LRYPSNPVKHGWRYPGIGEFQCYDQYMMQNLRKAAEARGHPFWARGPDNSGSYNSRPHETGFFCDGGDYDGYHGRFFLNWYSRVLVDHGDLVLSLAKLAF EGTCITAKLPSIHWWYKTASHAAELTAGIYNSCNRDGYAAITAMLKKHGIALNFCFSDFGMLNQPVDFAEGCADRDGLFWQVLNAAWDVSIQIGSESSFL SHDRLAYNKILDNVKPLNDPDGRHSLSFTYQRLSVALMDRHNLLEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 737 Download |
| MATDMQRLVV TSEEDDEEEE IDMDVKEEDN RGKHIDAQLM AGIDGGMLSD SCDSQFQYHQ 60 QLQEQASTPG GGNGGRRCRP VEEKERTKLR ERHRRAITAR ILAGLRRHGN YNLRVRADIN 120 DVIAALAREA GWVVLPDGTT FPSKSQGSRS VGGPSATATQ TTSLQTPQQA PSASLRGIST 180 GYQTSMDYDS GQLKSVFVPT PPPYDLSAGN VGDVDQARII PLVVGPEVTI DDKQIPDVQA 240 NLSEREFAGS AYVPVYVMLP LGVINMKCEL ADPDGLLQQL RALKSADVDG VKIDCWWGIV 300 EAHAPQEYNW HGYKKLCQIL RELRLKLQRS EVGDRLLGSL TSLLRVGMPF QGSYSGEERP 360 ESEWRQGQAV GMGEAVVIMS FHECGGNVGD DVCIPLPHWI AEIGRSNPDI FFTDKEGRRN 420 PECLSWGIDR ERVLRGRTAV EVYFDYMRSF RVEFDEFFED GIISLVEIGL GPCGELRYPS 480 NPVKHGWRYP GIGEFQCYDQ YMMQNLRKAA EARGHPFWAR GPDNSGSYNS RPHETGFFCD 540 GGDYDGYHGR FFLNWYSRVL VDHGDLVLSL AKLAFEGTCI TAKLPSIHWW YKTASHAAEL 600 TAGIYNSCNR DGYAAITAML KKHGIALNFC FSDFGMLNQP VDFAEGCADR DGLFWQVLNA 660 AWDVSIQIGS ESSFLSHDRL AYNKILDNVK PLNDPDGRHS LSFTYQRLSV ALMDRHNLLE 720 FESFVKRMHG KPPAYA* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 1.0e-108 | 231 | 733 | 518 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 1.0e-125 | 253 | 728 | 480 | + beta-amylase | ||
| PLN02801 | PLN02801 | 1.0e-148 | 252 | 729 | 485 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 1 | 731 | 744 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 82 | 731 | 661 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE99337.1 | 0 | 1 | 731 | 1 | 678 | putative beta-amylase [Arabidopsis thaliana] |
| EMBL | CBI40368.1 | 0 | 40 | 731 | 1 | 650 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_182112.2 | 0 | 1 | 731 | 1 | 678 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002273843.1 | 0 | 1 | 731 | 1 | 692 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511857.1 | 0 | 1 | 731 | 4 | 697 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1q6d_A | 0 | 252 | 730 | 11 | 443 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1wdp_A | 0 | 252 | 730 | 11 | 443 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1q6c_A | 0 | 252 | 730 | 11 | 443 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 252 | 730 | 11 | 443 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1wds_A | 0 | 252 | 730 | 11 | 443 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG638376 | 315 | 261 | 575 | 0 |
| DT587209 | 303 | 269 | 571 | 0 |
| EH764943 | 300 | 233 | 532 | 0 |
| HO064443 | 286 | 242 | 527 | 0 |
| DV021150 | 289 | 386 | 674 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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