Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10018878 |
Family | GT1 |
Protein Properties | Length: 657 Molecular Weight: 73190.8 Isoelectric Point: 4.9368 |
Chromosome | Chromosome/Scaffold: 103 Start: 287182 End: 290592 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT1 | 206 | 613 | 0 |
VGTRGDVQPFLAMAKRLQEFGHRVRLATHANFRSFVKAAGVGFYPLGGDPRVLAGYMARNKGLIPSSPGEISIQRKQMKDIIESLLPACTEPDPETGVSF KAQAIIANPPAYGHVHVAEALGIPIHIFFTMPWTPTYEFPHPLARVPQSAGYWLSYILVDLLIWWGIRGYINDFRKKLKLQPIAYYSMYHGSISHLPTGY LWSPSLVSKPMDWGPQVDVVGYCFLNLASKYEPQREFTEWIQRGTKPIYIGFGSMPLEDPEKTMEIILEALKETEQRGIIDRGWGGLGSLVEAPDDVFLL EDCPHDWLFPQCAAVVHHGGAGTTATGLRAGCPTTIVPFFGDQFFWGDRLFNKGLGPQPIPISQLTVENLSSAIQFMLQPEVKDRATELAKLIDNEDGVA GAVDAFHR |
Full Sequence |
---|
Protein Sequence Length: 657 Download |
MWLNLSDEMG ISCNNHPLSN SEEGFDDNHG LDEDSRRETP DVPESMTEDY KYPEEQFTVP 60 TSKESKNQPE LRSESQMESS DQEGSKTTSS PRKGLEHSIS EPVGAHRNLV VDEKDNITFY 120 RSITEQRSKH ELKFHRFFDQ EKNKLLIELV RVQRDGTVEV DLDKNDSVTS ELLEFHSVSG 180 ASFIIDEDTS AVNKPIPKLN IAILVVGTRG DVQPFLAMAK RLQEFGHRVR LATHANFRSF 240 VKAAGVGFYP LGGDPRVLAG YMARNKGLIP SSPGEISIQR KQMKDIIESL LPACTEPDPE 300 TGVSFKAQAI IANPPAYGHV HVAEALGIPI HIFFTMPWTP TYEFPHPLAR VPQSAGYWLS 360 YILVDLLIWW GIRGYINDFR KKLKLQPIAY YSMYHGSISH LPTGYLWSPS LVSKPMDWGP 420 QVDVVGYCFL NLASKYEPQR EFTEWIQRGT KPIYIGFGSM PLEDPEKTME IILEALKETE 480 QRGIIDRGWG GLGSLVEAPD DVFLLEDCPH DWLFPQCAAV VHHGGAGTTA TGLRAGCPTT 540 IVPFFGDQFF WGDRLFNKGL GPQPIPISQL TVENLSSAIQ FMLQPEVKDR ATELAKLIDN 600 EDGVAGAVDA FHRQLPSTMP SPAASSSSDS DDELSNGLQW FFAKIGMICC LPCSPN* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01426 | MGT | 3.0e-5 | 210 | 609 | 416 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
COG1819 | COG1819 | 6.0e-36 | 201 | 618 | 430 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
pfam03033 | Glyco_transf_28 | 8.0e-37 | 201 | 345 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
cd03784 | GT1_Gtf_like | 6.0e-126 | 200 | 613 | 419 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18214.1 | 0 | 10 | 653 | 55 | 696 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_175027.1 | 0 | 64 | 653 | 21 | 612 | UDP-glucose:sterol glucosyltransferase, putative [Arabidopsis thaliana] |
RefSeq | XP_002265312.1 | 0 | 17 | 653 | 46 | 680 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302172.1 | 0 | 9 | 654 | 1 | 616 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524293.1 | 0 | 95 | 653 | 18 | 577 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 1e-31 | 199 | 621 | 1 | 390 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 3h4i_A | 1e-31 | 199 | 621 | 1 | 390 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1iir_A | 3e-27 | 199 | 618 | 1 | 405 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
PDB | 1rrv_B | 3e-26 | 199 | 598 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1rrv_A | 3e-26 | 199 | 598 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DT547914 | 322 | 217 | 537 | 0 |
HO801427 | 423 | 228 | 642 | 0 |
CO103793 | 276 | 212 | 486 | 0 |
GT172550 | 310 | 174 | 482 | 0 |
HO801427 | 197 | 199 | 378 | 1e-21 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|