| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10019325 |
| Family | GT43 |
| Protein Properties | Length: 434 Molecular Weight: 47650.9 Isoelectric Point: 4.5987 |
| Chromosome | Chromosome/Scaffold: 377 Start: 546809 End: 550992 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT43 | 164 | 389 | 0 |
| VVWIVVEAGGVTNETANLVSKSGLKNTIHVGVDERMPNTWEGRRRLESEMRIRALRVVREKKLDGIVMFADDSNMHSMELFDEIQTVNWFGALSLGILSH SNGVDDPSMAGIPVQGPACNASDKFSGWHTFDDSQPYDGNNSEAVYIDDAAAVLPKKHEWAGFVLNSRLLWEEDDGVEEDKPRWVRDLDSVDVVELSPLS LLKDSSMVEPLGSCGRRVLLWWVRVE | |||
| Full Sequence |
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| Protein Sequence Length: 434 Download |
| MITRGDALAR IPSNLFPFKF NPPTSSDNYL PPSHFPFISE PRKNLRDREG KESKGGGDHD 60 DSPELPHPPA RNFPQLIRGK KEEGAGGAAR DPNPGVAAPG PGGGDEGAPD DRQSAEGAED 120 TVRGEESEDG DRRDSDLRTD FSGSAFDRRG SLADARPIRR RLAVVWIVVE AGGVTNETAN 180 LVSKSGLKNT IHVGVDERMP NTWEGRRRLE SEMRIRALRV VREKKLDGIV MFADDSNMHS 240 MELFDEIQTV NWFGALSLGI LSHSNGVDDP SMAGIPVQGP ACNASDKFSG WHTFDDSQPY 300 DGNNSEAVYI DDAAAVLPKK HEWAGFVLNS RLLWEEDDGV EEDKPRWVRD LDSVDVVELS 360 PLSLLKDSSM VEPLGSCGRR VLLWWVRVEA RFDSKFPAGW MIDPRPDITV PSIETNSLAG 420 ITPELNSEEP SPH* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 6.0e-10 | 160 | 349 | 202 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 2.0e-43 | 164 | 390 | 237 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 8.0e-45 | 155 | 390 | 254 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI93186.1 | 0 | 164 | 415 | 190 | 441 | glycosyltransferase [Gossypium raimondii] |
| EMBL | CBI21374.1 | 0 | 164 | 415 | 159 | 415 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_201524.1 | 0 | 164 | 415 | 184 | 443 | glycosyl transferase family 43 protein [Arabidopsis thaliana] |
| RefSeq | XP_002306485.1 | 0 | 164 | 415 | 188 | 444 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002310709.1 | 0 | 164 | 415 | 189 | 449 | glycosyl transferase, CAZy family GT43 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 0.000008 | 166 | 389 | 36 | 234 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 1v84_A | 0.000008 | 166 | 389 | 36 | 234 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 1v83_B | 0.000008 | 166 | 389 | 36 | 234 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 1v83_A | 0.000008 | 166 | 389 | 36 | 234 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 1v82_B | 0.000008 | 166 | 389 | 36 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CO114164 | 262 | 164 | 415 | 0 |
| DR928119 | 265 | 166 | 415 | 0 |
| HO800917 | 262 | 164 | 415 | 0 |
| CK268779 | 248 | 164 | 398 | 0 |
| FY469831 | 259 | 174 | 416 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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