Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10019479 |
Family | GT47 |
Protein Properties | Length: 412 Molecular Weight: 46555.9 Isoelectric Point: 8.451 |
Chromosome | Chromosome/Scaffold: 906 Start: 415966 End: 417840 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 43 | 338 | 0 |
RLKVYVYELPSKYNKKLLQKDPRCSTHMFAAEIFMHRFLLSSPVRTLDPNEADWFYTPIYVTCDLTPTGLPLPFKSPRMMRSAIQLVSSKWPYWNRTEGA DHFFVVPHDFGACFHYQEEIAIKRGILALLGRATLVQTFGQRNHVCLKDGSITIPPYAPPQKMQARHIPPETPRSIFVYFRGLFYDVNNDPKGGYYARGA RAAVWENFKNNPLFDISTDHPTTYYEDMQRSIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVEEEKVPNLDTILTSI |
Full Sequence |
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Protein Sequence Length: 412 Download |
MTTLLLLLAV SFSAIVINAD PRLRTERISG SAGDVLDDNP VGRLKVYVYE LPSKYNKKLL 60 QKDPRCSTHM FAAEIFMHRF LLSSPVRTLD PNEADWFYTP IYVTCDLTPT GLPLPFKSPR 120 MMRSAIQLVS SKWPYWNRTE GADHFFVVPH DFGACFHYQE EIAIKRGILA LLGRATLVQT 180 FGQRNHVCLK DGSITIPPYA PPQKMQARHI PPETPRSIFV YFRGLFYDVN NDPKGGYYAR 240 GARAAVWENF KNNPLFDIST DHPTTYYEDM QRSIFCLCPL GWAPWSPRLV EAVVFGCIPV 300 IIADDIVLPF ADAIPWEEIG VFVEEEKVPN LDTILTSIPP EVVLRKQRLL ANPSMKRAML 360 FPQPAQAGDA FHQILNGLAR KLPHDRSKVF LSPGQKVLNW TSGPPGDMKP W* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-82 | 43 | 338 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33320.1 | 0 | 22 | 411 | 24 | 412 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
RefSeq | XP_002284685.1 | 0 | 4 | 411 | 10 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297880.1 | 0 | 1 | 411 | 1 | 412 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304637.1 | 0 | 18 | 411 | 21 | 413 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511079.1 | 0 | 24 | 411 | 31 | 417 | catalytic, putative [Ricinus communis] |