| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10019642 |
| Family | AA1 |
| Protein Properties | Length: 606 Molecular Weight: 67812.3 Isoelectric Point: 9.3839 |
| Chromosome | Chromosome/Scaffold: 420 Start: 46770 End: 49879 |
| Description | SKU5 similar 15 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 100 | 567 | 0 |
| WEVTYGTISPLGVPQRGILINGQFPGPPINAVTNDNILVDVINKLDVPFLITWNGIKQRRTSWQDGVLGTQCPIPPNSNWTYKFQVKDQIGTFNYFPSIG LQRAAGGFGALNVDQRSVIFKPYPIPVEGFTLLISDWYKTDFKVLEQTLDQGIALPVPDGLLINGLPNGKAVFTGEKDKLYRFRISNVGIATSINFRIQG HTMSLIEVEGAHTLQEVYESLDIHCGQSVSVLVRFHAPVTKDYFIVASTRFTKPILTTTAIIKYAGSTTPASLPLPIGPTYHLHWSMKQARTLRLNLTAN AARPNPQGSFHYGTIQVMKTIFLTNTASKIDGKLRYAVNSVSHVDPPTPLKLADWYNIPGVYKLNSVSDTPTNTTPILAPAVLGFELHDFVEIIFQNTEN TVQSWHMDGSSFYIVGYGNGPWTPKMRRRYNLVDGVPRHTVQVYPTSWSAILVSLDNKGMWNLRSAIW | |||
| Full Sequence |
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| Protein Sequence Length: 606 Download |
| MPIRPWLHPS RFPFPPIVLA LVPMETERLP AWIAPPTGLE IHAGSFTILN FEMGGQVKDI 60 ITSVVLCKLK MRQAGFFLCY FLGALCFLVQ AEDPYRYYTW EVTYGTISPL GVPQRGILIN 120 GQFPGPPINA VTNDNILVDV INKLDVPFLI TWNGIKQRRT SWQDGVLGTQ CPIPPNSNWT 180 YKFQVKDQIG TFNYFPSIGL QRAAGGFGAL NVDQRSVIFK PYPIPVEGFT LLISDWYKTD 240 FKVLEQTLDQ GIALPVPDGL LINGLPNGKA VFTGEKDKLY RFRISNVGIA TSINFRIQGH 300 TMSLIEVEGA HTLQEVYESL DIHCGQSVSV LVRFHAPVTK DYFIVASTRF TKPILTTTAI 360 IKYAGSTTPA SLPLPIGPTY HLHWSMKQAR TLRLNLTANA ARPNPQGSFH YGTIQVMKTI 420 FLTNTASKID GKLRYAVNSV SHVDPPTPLK LADWYNIPGV YKLNSVSDTP TNTTPILAPA 480 VLGFELHDFV EIIFQNTENT VQSWHMDGSS FYIVGYGNGP WTPKMRRRYN LVDGVPRHTV 540 QVYPTSWSAI LVSLDNKGMW NLRSAIWAKR YLGQQLYMRV WNDERSLFTE SNPPPNVLFC 600 GSAKP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02835 | PLN02835 | 0 | 77 | 603 | 532 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 71 | 604 | 544 | + copper ion binding / oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 85 | 603 | 519 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 87 | 603 | 520 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 76 | 601 | 538 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18561.1 | 0 | 52 | 604 | 56 | 599 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195433.1 | 0 | 71 | 604 | 1 | 538 | sks15 (SKU5 Similar 15); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002268020.1 | 0 | 42 | 604 | 102 | 665 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310164.1 | 0 | 71 | 604 | 1 | 535 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522339.1 | 0 | 71 | 604 | 1 | 538 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 96 | 573 | 4 | 516 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asq_A | 0 | 96 | 573 | 4 | 516 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_B | 0 | 96 | 573 | 4 | 516 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_A | 0 | 96 | 573 | 4 | 516 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1aso_B | 0 | 96 | 573 | 4 | 516 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO801725 | 437 | 169 | 603 | 0 |
| JG728954 | 391 | 194 | 584 | 0 |
| HO796073 | 510 | 117 | 602 | 0 |
| EX275490 | 331 | 242 | 572 | 0 |
| CX663327 | 284 | 88 | 371 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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