| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10020022 |
| Family | AA1 |
| Protein Properties | Length: 545 Molecular Weight: 61528.1 Isoelectric Point: 10.2157 |
| Chromosome | Chromosome/Scaffold: 23 Start: 457383 End: 460445 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 48 | 499 | 0 |
| QQGILINGEFPGPHIDAVTNDNVIINVYNYLKEPFLLSWNGIQHRRNSWQDGVYGTNCPINPGRNFTYILQFKDQIGTFFYFPSLGFHKAAGGFGSIRVW SRPRIPVPFPPPAGDFVLLAGDWYKTNHYILRRFLNAGRALPMPDGLLINGRGWNGNTFRVDPGRTYRFRISNVGLATSINFRIQGHTMKLVEAEGSHTV QNIYTSLDVHLGQSYSVLVTANQPAKDYYIVVSTRFTTKVLTTTSVLHYSNSRSGVSGPIPGAPTTEINWSINQARTIRRNLTASGPRPNPQGSYHYGMI KPTRTITLANSAPWINGKQRYAVNSVSFVPASTPLKLADYFNIPGVFNVGSIPMSPTWGNAYLQTSVMGANFREYVEIIFQNWENTVQSWHIDGHAFFVV GMDGGQWTSASRLRYNLRDTVSRCTVQVYPRAWTAIYMALDNVGMWNIRSEN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 545 Download |
| MIEPSSKLVY SVSIFFLLAL GLVNADSPYR FYTWKVTYGN IYPLGVKQQG ILINGEFPGP 60 HIDAVTNDNV IINVYNYLKE PFLLSWNGIQ HRRNSWQDGV YGTNCPINPG RNFTYILQFK 120 DQIGTFFYFP SLGFHKAAGG FGSIRVWSRP RIPVPFPPPA GDFVLLAGDW YKTNHYILRR 180 FLNAGRALPM PDGLLINGRG WNGNTFRVDP GRTYRFRISN VGLATSINFR IQGHTMKLVE 240 AEGSHTVQNI YTSLDVHLGQ SYSVLVTANQ PAKDYYIVVS TRFTTKVLTT TSVLHYSNSR 300 SGVSGPIPGA PTTEINWSIN QARTIRRNLT ASGPRPNPQG SYHYGMIKPT RTITLANSAP 360 WINGKQRYAV NSVSFVPAST PLKLADYFNI PGVFNVGSIP MSPTWGNAYL QTSVMGANFR 420 EYVEIIFQNW ENTVQSWHID GHAFFVVGMD GGQWTSASRL RYNLRDTVSR CTVQVYPRAW 480 TAIYMALDNV GMWNIRSENW ERQYLGQQLY LRVYSASRSW RDELPIPKNA LICGRARGRH 540 TRPL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 12 | 541 | 530 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 17 | 541 | 525 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 19 | 538 | 528 | + copper ion binding / oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 20 | 541 | 525 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 1 | 537 | 548 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 11 | 544 | 10 | 544 | unknown [Populus trichocarpa] |
| RefSeq | NP_193932.1 | 0 | 12 | 544 | 7 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002272880.1 | 0 | 11 | 544 | 3 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332613.1 | 0 | 11 | 544 | 10 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 23 | 544 | 20 | 541 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 27 | 534 | 1 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1asq_A | 0 | 27 | 534 | 1 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1asp_B | 0 | 27 | 534 | 1 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1asp_A | 0 | 27 | 534 | 1 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1aso_B | 0 | 27 | 534 | 1 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
