| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10020076 |
| Family | AA6 |
| Protein Properties | Length: 197 Molecular Weight: 20611.4 Isoelectric Point: 5.9361 |
| Chromosome | Chromosome/Scaffold: 23 Start: 706681 End: 707466 |
| Description | Quinone reductase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA6 | 1 | 188 | 0 |
| MYGHVEKLAEEIKKGASTVDGVEVKLWQVAETLPEEVLGKMGAPAKKSEVPIVTASELAEADGILFGFPTRFGMMAAQFKAFMDSTGGLWKTQALQGKPA GLFYSTGSQGGGQETTPLTAITQLVHHGMLFVPVGYTFGGGMFEMEEVKGGSPYGAGTYAGDGSRQPSDLELGLAHHQGKHFAAIAKK | |||
| Full Sequence |
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| Protein Sequence Length: 197 Download |
| MYGHVEKLAE EIKKGASTVD GVEVKLWQVA ETLPEEVLGK MGAPAKKSEV PIVTASELAE 60 ADGILFGFPT RFGMMAAQFK AFMDSTGGLW KTQALQGKPA GLFYSTGSQG GGQETTPLTA 120 ITQLVHHGML FVPVGYTFGG GMFEMEEVKG GSPYGAGTYA GDGSRQPSDL ELGLAHHQGK 180 HFAAIAKKLK GSESDA* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00258 | Flavodoxin_1 | 1.0e-7 | 1 | 103 | 112 | + Flavodoxin. | ||
| pfam03358 | FMN_red | 3.0e-11 | 6 | 136 | 131 | + NADPH-dependent FMN reductase. | ||
| COG0655 | WrbA | 6.0e-36 | 1 | 191 | 197 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
| TIGR01755 | flav_wrbA | 7.0e-56 | 1 | 189 | 190 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
| PRK03767 | PRK03767 | 1.0e-67 | 1 | 191 | 192 | + NAD(P)H:quinone oxidoreductase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
| GO:0050662 | coenzyme binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD38143.1 | 0 | 1 | 192 | 12 | 202 | AF139496_1 unknown [Prunus armeniaca] |
| GenBank | ACU19740.1 | 0 | 1 | 192 | 15 | 205 | unknown [Glycine max] |
| EMBL | CAD31838.1 | 0 | 2 | 193 | 14 | 204 | putative quinone oxidoreductase [Cicer arietinum] |
| RefSeq | XP_002518592.1 | 0 | 2 | 192 | 13 | 202 | Flavoprotein wrbA, putative [Ricinus communis] |
| RefSeq | XP_002534445.1 | 0 | 1 | 192 | 12 | 202 | Minor allergen Alt a, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3b6m_B | 0 | 1 | 191 | 11 | 198 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3b6m_A | 0 | 1 | 191 | 11 | 198 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3b6k_B | 0 | 1 | 191 | 11 | 198 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3b6k_A | 0 | 1 | 191 | 11 | 198 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3b6j_B | 0 | 1 | 191 | 11 | 198 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG244293 | 197 | 1 | 197 | 0 |
| JG085589 | 197 | 1 | 197 | 0 |
| JG093861 | 197 | 1 | 197 | 0 |
| GW867275 | 197 | 1 | 197 | 0 |
| JG233365 | 196 | 2 | 197 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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