y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10020313 |
Family | CE8 |
Protein Properties | Length: 380 Molecular Weight: 40186 Isoelectric Point: 8.6253 |
Chromosome | Chromosome/Scaffold: 641 Start: 347348 End: 348487 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 71 | 362 | 0 |
AVVAADGSGGFRTISEALSAYKLNEFGRFVVYVKTGEYDETITVRKNQVNVTIYGDGANQTVVYGSKSTELGIATYETATLAVLGDGFVCRSMSIENRAK RSAGNSSAAAITAVAVRVQADKSAFYNCTIEGGKSALYSLAHRQFYSECKISGSGDLIMGDAAAVIQDSEILISGGGAVTAQGRAERYETTGFVLQNCTV KGISGGKIVLGRPWGKRSRAVVMESYLGENVAAEGWKVTAGGGEVAPAEEKYYYAEFGNYGPGSGTDKRVRGANVLNKDGSDAVRFGPSLFI |
Full Sequence |
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Protein Sequence Length: 380 Download |
MDRLSAAVAY QISCRDGLRR IGDVRTRLGK PIKMTSNSLA IVTSTFNSRN ENFPPIQNSN 60 TGGSEPPRPD AVVAADGSGG FRTISEALSA YKLNEFGRFV VYVKTGEYDE TITVRKNQVN 120 VTIYGDGANQ TVVYGSKSTE LGIATYETAT LAVLGDGFVC RSMSIENRAK RSAGNSSAAA 180 ITAVAVRVQA DKSAFYNCTI EGGKSALYSL AHRQFYSECK ISGSGDLIMG DAAAVIQDSE 240 ILISGGGAVT AQGRAERYET TGFVLQNCTV KGISGGKIVL GRPWGKRSRA VVMESYLGEN 300 VAAEGWKVTA GGGEVAPAEE KYYYAEFGNY GPGSGTDKRV RGANVLNKDG SDAVRFGPSL 360 FIQGDEWISQ AGVPFRGGL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02217 | PLN02217 | 3.0e-76 | 4 | 379 | 413 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 2.0e-79 | 3 | 379 | 417 | + pectinesterase | ||
PLN02468 | PLN02468 | 8.0e-83 | 4 | 379 | 406 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 5.0e-99 | 70 | 365 | 310 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 4.0e-99 | 4 | 379 | 424 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26012.1 | 0 | 4 | 379 | 158 | 567 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275000.1 | 0 | 4 | 379 | 158 | 567 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516193.1 | 0 | 4 | 379 | 185 | 592 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002519324.1 | 0 | 4 | 379 | 158 | 567 | Pectinesterase-3 precursor, putative [Ricinus communis] |
RefSeq | XP_002525673.1 | 0 | 4 | 379 | 177 | 570 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 70 | 379 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 69 | 379 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 0.0000000000002 | 70 | 341 | 5 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.0000000000002 | 70 | 341 | 5 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2nt9_B | 0.0000000000002 | 70 | 341 | 5 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR194961 | 290 | 97 | 368 | 0 |
CF208165 | 275 | 76 | 338 | 0 |
CO102256 | 267 | 56 | 306 | 0 |
GR461604 | 276 | 77 | 340 | 0 |
GR459079 | 248 | 68 | 303 | 0 |
Orthologous Group | |||||
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Species | ID | ||||
Linum usitatissimum | Lus10005678 | ||||
Ricinus communis | 30072.m000929 |
Sequence Alignments (This image is cropped. Click for full image.) |
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