| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10020382 |
| Family | GT1 |
| Protein Properties | Length: 595 Molecular Weight: 65361.8 Isoelectric Point: 6.85 |
| Chromosome | Chromosome/Scaffold: 641 Start: 635805 End: 640789 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT1 | 154 | 559 | 0 |
| GTRGDVQPFVAIGKRLQEDGHRVRLATHANFKDFVLTAGLEFFPLGGDPKVLAGYMVKNKGFFPSGPSEIPVQRQQMREIIFSLLPACQDPDPETNIPFR AEAIIANPPAYGHTHVAEALKVPLHVIFTMPWTPTTEFPHPMSRVKQPVANRLSYQIVDAFIWLGIRDLINEFRKKQLKLRRVTYLSGHSSSPPDLPYGY IWSPHLLPKPKDWGPKIDVVGFCFLDLASCYVPPDDLVQWLEAGDPPVYVGFGSLPVQEPEKMTQMIVKALELTGQRGIINKGWGGLGNLAEPKDSIYLL DNCPHDWLFLRCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARGVGPAPIPVDEFSTEKLVEAIKYMLDPDVKQRAVEIGKAMENEDGVA GAVRAF | |||
| Full Sequence |
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| Protein Sequence Length: 595 Download |
| MAHKSPEDDR ESIPVHQSSS SSESVSVDVD NSTDNAASSI SNSSGEASSP AKTESHLSFR 60 QKAKAFKDSH KLGMVVAKLF DEKIPLKKKL KLFNRVATVK DDGTVQFDVP VDIKPQSLDF 120 GTGVVYHEAG DGESVDTTAL KDIPPLQIVM LIVGTRGDVQ PFVAIGKRLQ EDGHRVRLAT 180 HANFKDFVLT AGLEFFPLGG DPKVLAGYMV KNKGFFPSGP SEIPVQRQQM REIIFSLLPA 240 CQDPDPETNI PFRAEAIIAN PPAYGHTHVA EALKVPLHVI FTMPWTPTTE FPHPMSRVKQ 300 PVANRLSYQI VDAFIWLGIR DLINEFRKKQ LKLRRVTYLS GHSSSPPDLP YGYIWSPHLL 360 PKPKDWGPKI DVVGFCFLDL ASCYVPPDDL VQWLEAGDPP VYVGFGSLPV QEPEKMTQMI 420 VKALELTGQR GIINKGWGGL GNLAEPKDSI YLLDNCPHDW LFLRCKAVVH HGGAGTTAAG 480 LKAACPTTIV PFFGDQPFWG DRVHARGVGP APIPVDEFST EKLVEAIKYM LDPDVKQRAV 540 EIGKAMENED GVAGAVRAFY KHFPGKKTEE EDACEVIGHH HHSKLSIRGC FGIH* 600 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03033 | Glyco_transf_28 | 3.0e-33 | 148 | 292 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| COG1819 | COG1819 | 4.0e-34 | 148 | 567 | 432 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 1.0e-121 | 148 | 562 | 419 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 6 | 571 | 2 | 585 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 77 | 592 | 103 | 613 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 77 | 592 | 150 | 660 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512608.1 | 0 | 19 | 592 | 13 | 594 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| RefSeq | XP_002521125.1 | 0 | 15 | 592 | 46 | 624 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 5e-31 | 146 | 568 | 1 | 386 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3h4i_A | 5e-31 | 146 | 568 | 1 | 386 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 1e-22 | 146 | 539 | 1 | 376 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 1e-22 | 146 | 539 | 1 | 376 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 7e-22 | 389 | 557 | 229 | 392 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 155 | 489 | 0 |
| GO883166 | 334 | 108 | 441 | 0 |
| HO626576 | 428 | 141 | 564 | 0 |
| EH765453 | 283 | 154 | 436 | 0 |
| GT046352 | 32 | 482 | 513 | 0.0001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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