Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10020506 |
Family | GT4 |
Protein Properties | Length: 806 Molecular Weight: 92359.7 Isoelectric Point: 6.1614 |
Chromosome | Chromosome/Scaffold: 44 Start: 747271 End: 750680 |
Description | sucrose synthase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 565 | 731 | 0 |
LKDRSKPIIFTMARLDRVKNLTGLVEWYGKNKKLRELVNLVIVGGDRRKESKDLEEQAEMKKMYSLIEEYKLQGQFRWISSQMDRVRNGELYRCIADTKG AFVQPALYEAFGLTVVEAMTCGLPTFATNNGGPAEIIVHGKSGYHIDPYHGDQAAELLVDFFEKSKA |
Full Sequence |
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Protein Sequence Length: 806 Download |
MADRVITRVH SIKERLDGTL AANRNELVSF LSRIEAKGKG ILQHHHIVSE FEAIPEANQT 60 VLQEGVFGEV LRSAQEAIVL PPWVALAVRP RPGVWEYFRV NLHALVVEEL TVPEYLHFKE 120 ELVDGTANGN FVLELDFEPF NASFPRSSLS KSIGNGVEFL NRHLSAKLFH DKESMHPLLE 180 FLKVHCHKGK NMMLNDRIQN FNSLQHVLRK AEEYLITLPA ETPYSQFEHK FQDIGLERGW 240 GDCAERVLEM IQLLLDLLEA PDPCTLETFL GRIPMALNVV IMSPHGYFAQ DNVLGYPDTG 300 GQVVYILDQV RALEEEMLLR IKQQGLDITP RILIITRLLP DAVGTTCGQR MERVYGTEYS 360 DILRIPFRTE KGIVRKWISR FEVWPYLETF TEDVAVEIGK EFQGKPDLII GNYSDGNIVA 420 TLLSHKLGVT ECTIAHALEK TKYPESDIYW KKMDEKYHFS CQFTADLIAM NHADFIITST 480 FQEIAGSKDT VGQYESHTSF TLPGLYRVVH GINVFDPKFN IVSPGADMSI YFSYNEEKRR 540 LKHFHSEIEE LLYSDVENKE HLGVLKDRSK PIIFTMARLD RVKNLTGLVE WYGKNKKLRE 600 LVNLVIVGGD RRKESKDLEE QAEMKKMYSL IEEYKLQGQF RWISSQMDRV RNGELYRCIA 660 DTKGAFVQPA LYEAFGLTVV EAMTCGLPTF ATNNGGPAEI IVHGKSGYHI DPYHGDQAAE 720 LLVDFFEKSK ADPSHWDKIS DGGLQRIQEK YTWQIYSQRL LTLTAVYGFW KHVSNLDRQE 780 SRRYIEMFYA LKYRKLAEGV PLTEE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 3.0e-63 | 277 | 763 | 496 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 1.0e-120 | 278 | 762 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 805 | 808 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 24 | 802 | 783 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 7 | 554 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD96570.1 | 0 | 1 | 805 | 1 | 805 | sucrose synthase [Manihot esculenta] |
GenBank | ACV72640.1 | 0 | 1 | 805 | 1 | 805 | sucrose synthase 1 [Gossypium hirsutum] |
DDBJ | BAA88905.1 | 0 | 1 | 805 | 1 | 805 | sucrose synthase [Citrus unshiu] |
DDBJ | BAA89049.1 | 0 | 1 | 805 | 1 | 805 | sucrose synthase [Citrus unshiu] |
RefSeq | XP_002324136.1 | 0 | 1 | 805 | 1 | 805 | hypothetical protein POPTRDRAFT_835735 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 2 | 805 | 4 | 807 | A Chain A, Human Beta-Hexosaminidase B |
PDB | 3s29_G | 0 | 2 | 805 | 4 | 807 | A Chain A, Human Beta-Hexosaminidase B |
PDB | 3s29_F | 0 | 2 | 805 | 4 | 807 | A Chain A, Human Beta-Hexosaminidase B |
PDB | 3s29_E | 0 | 2 | 805 | 4 | 807 | A Chain A, Human Beta-Hexosaminidase B |
PDB | 3s29_D | 0 | 2 | 805 | 4 | 807 | A Chain A, Human Beta-Hexosaminidase B |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 806 | 1 | 806 | 0 |
BU103683 | 805 | 2 | 805 | 0 |
CX109054 | 594 | 105 | 698 | 0 |
FG227316 | 453 | 276 | 728 | 0 |
GW837855 | 412 | 342 | 753 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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