Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10020618 |
Family | GH17 |
Protein Properties | Length: 428 Molecular Weight: 47063.6 Isoelectric Point: 5.9128 |
Chromosome | Chromosome/Scaffold: 77 Start: 674720 End: 677024 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 62 | 378 | 0 |
VGINYGQIANNLPSVSRVATLLQSLNISRVKLYDADPNVLKAFANTNVEFIIGLGNEFLQEVKDPAKAQSWIEQHVKPYLPQTKITSILVGNEVFMSNNT QLEYNLLPAMQTVYKSLVSMGLDKQVTVTTAHSLNILANSYPPSSGSFRPDIAELIKPLLDFHAQTDSPFLINVYPFFAYKGSPGQVSLDYALFQPNQGM TDPATNLKYDNMLYAQLDAVYSAMKAMGHTDIEVRISETGWPSKGDSDEAGATPQNAGLYNGNLLKRVMDKESTPGKPSVPIDVHVFALFNENLKPGPAS ERNYGLFYPDGSPVYNI |
Full Sequence |
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Protein Sequence Length: 428 Download |
MASSVSRLLP LFFLMLLSGS FKIGTWGKTL FSSCQLLDYS FLCVFYQLFF LGAIHRTDGG 60 GVGINYGQIA NNLPSVSRVA TLLQSLNISR VKLYDADPNV LKAFANTNVE FIIGLGNEFL 120 QEVKDPAKAQ SWIEQHVKPY LPQTKITSIL VGNEVFMSNN TQLEYNLLPA MQTVYKSLVS 180 MGLDKQVTVT TAHSLNILAN SYPPSSGSFR PDIAELIKPL LDFHAQTDSP FLINVYPFFA 240 YKGSPGQVSL DYALFQPNQG MTDPATNLKY DNMLYAQLDA VYSAMKAMGH TDIEVRISET 300 GWPSKGDSDE AGATPQNAGL YNGNLLKRVM DKESTPGKPS VPIDVHVFAL FNENLKPGPA 360 SERNYGLFYP DGSPVYNIGS VMRDGQQRSY LPDMTYSSSP KMNRLNSLFL ATSSMAPPHM 420 EDDKVDG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 60 | 371 | 321 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-101 | 62 | 378 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94377.1 | 0 | 59 | 416 | 24 | 374 | unknown [Populus trichocarpa] |
GenBank | ACU21124.1 | 0 | 56 | 410 | 31 | 376 | unknown [Glycine max] |
RefSeq | XP_002312820.1 | 0 | 59 | 403 | 24 | 361 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328249.1 | 0 | 56 | 399 | 23 | 359 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 56 | 403 | 7 | 347 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 62 | 378 | 2 | 313 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3f55_C | 0 | 62 | 378 | 2 | 313 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3f55_B | 0 | 62 | 378 | 2 | 313 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3f55_A | 0 | 62 | 378 | 2 | 313 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
PDB | 3em5_D | 0 | 62 | 378 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |