| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10020679 |
| Family | CE8 |
| Protein Properties | Length: 156 Molecular Weight: 17129 Isoelectric Point: 7.1945 |
| Chromosome | Chromosome/Scaffold: 303 Start: 162014 End: 162605 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 1 | 111 | 0 |
| MIGDGIGKTTITGNRSVVDGSTTFNSSTFAVNAAGFVGVGLTFRNTAGPVKHQAVAVRNSADMSAFFNCSFEGYQDTLYVHSLRQFYRDCDIYGTIDYIF GNAAVVFQHCR | |||
| Full Sequence |
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| Protein Sequence Length: 156 Download |
| MIGDGIGKTT ITGNRSVVDG STTFNSSTFA VNAAGFVGVG LTFRNTAGPV KHQAVAVRNS 60 ADMSAFFNCS FEGYQDTLYV HSLRQFYRDC DIYGTIDYIF GNAAVVFQHC RRGRRVPELP 120 DDVQAPSPQP VQRHHSTGKN RPEPEHRDLD PELQH* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02416 | PLN02416 | 2.0e-48 | 14 | 117 | 104 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02506 | PLN02506 | 8.0e-49 | 14 | 138 | 125 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN03043 | PLN03043 | 8.0e-60 | 14 | 144 | 131 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| pfam01095 | Pectinesterase | 2.0e-63 | 14 | 110 | 97 | + Pectinesterase. | ||
| PLN02713 | PLN02713 | 5.0e-66 | 14 | 117 | 104 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABQ45843.1 | 0 | 1 | 129 | 20 | 147 | pectin methylesterase 3 [Citrus unshiu] |
| EMBL | CAN60506.1 | 0 | 1 | 146 | 2 | 136 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_001055310.1 | 0 | 1 | 153 | 314 | 457 | Os05g0361500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002512460.1 | 0 | 1 | 117 | 289 | 405 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002512461.1 | 0 | 1 | 149 | 308 | 459 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 3e-39 | 1 | 146 | 61 | 195 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-38 | 1 | 146 | 57 | 191 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.0000000000008 | 19 | 110 | 79 | 188 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.0000000000008 | 19 | 110 | 79 | 188 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.0000000000008 | 19 | 110 | 79 | 188 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| AW598693 | 133 | 14 | 146 | 0 |
| AW620942 | 133 | 14 | 146 | 0 |
| DC899549 | 133 | 14 | 146 | 0 |
| CN494237 | 131 | 14 | 144 | 0 |
| GO021013 | 133 | 14 | 146 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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