| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10020875 |
| Family | GH35 |
| Protein Properties | Length: 962 Molecular Weight: 108199 Isoelectric Point: 5.0259 |
| Chromosome | Chromosome/Scaffold: 711 Start: 349134 End: 358716 |
| Description | Glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 38 | 306 | 0 |
| LIIDGERRMLFSGSIHYPRSTPQMWESLIAKAKQGGVDVIETYVFWNLHEPQPGQYDFSGRNDIVKFIKEVQAQGLYVAIRIGPFIESEWTYGGLPFWLH NIPGIVYRTDNEPFKPLLLHYQRVMQSFTTKIVDLMKSEGLFASQGGPIILAQIENEYQNIEAAFAEGPSYVKWAANMAVELQTGVPWVMCKQTDAPDPV INTCNGMRCGDTFTGPNSPSKPALWTENWTSFLQRFGEETYLRSAEDIAFHTLLFIVAKNGSFINYYMM | |||
| GH35 | 306 | 587 | 0 |
| MWESLIAKAKQGGVDVIETYVFWNLHEPQPGQYDFSGRNDIVKFIKDVQAQGLYVALRIGPFIESEWTYGGLPFWLHNIPGIVYRTDNEPFKRVMQSFTT KIVDLMKSEGLFASQGGPIILAQIENEYQNIEAAFAEGPSYVKWAANMAVELQTGVPWVMCKQTDAPDPVINTCNGMRCGDTFTGPNSPSKPALWTENWT SFLQRFGEETYLRSAEDIAFHTLLFIVAKNGSFINYYMYHGGTNFGRSGAAYMVTSYYDQAPIDEYGLIREPKWSHLKEMHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 962 Download |
| MDCTRRWGWL WAAVVVVATT TMAAVAAGGN VTYDGRALII DGERRMLFSG SIHYPRSTPQ 60 MWESLIAKAK QGGVDVIETY VFWNLHEPQP GQYDFSGRND IVKFIKEVQA QGLYVAIRIG 120 PFIESEWTYG GLPFWLHNIP GIVYRTDNEP FKPLLLHYQR VMQSFTTKIV DLMKSEGLFA 180 SQGGPIILAQ IENEYQNIEA AFAEGPSYVK WAANMAVELQ TGVPWVMCKQ TDAPDPVINT 240 CNGMRCGDTF TGPNSPSKPA LWTENWTSFL QRFGEETYLR SAEDIAFHTL LFIVAKNGSF 300 INYYMMWESL IAKAKQGGVD VIETYVFWNL HEPQPGQYDF SGRNDIVKFI KDVQAQGLYV 360 ALRIGPFIES EWTYGGLPFW LHNIPGIVYR TDNEPFKRVM QSFTTKIVDL MKSEGLFASQ 420 GGPIILAQIE NEYQNIEAAF AEGPSYVKWA ANMAVELQTG VPWVMCKQTD APDPVINTCN 480 GMRCGDTFTG PNSPSKPALW TENWTSFLQR FGEETYLRSA EDIAFHTLLF IVAKNGSFIN 540 YYMYHGGTNF GRSGAAYMVT SYYDQAPIDE YGLIREPKWS HLKEMHAAVK SCSSTLLNGV 600 KTSFSLGEFQ QAYVYEDSKS CAAFLVNSGS KNATVVFRNR TFELIPKSIS ILPDCRNVVY 660 NSGKASTGFS NRRETVSKIL DGTENQWEEY RDPVPSFADT SIRFNQLEEQ TIITNDSSDY 720 LWYTLSFQPN STSCAAANLR VKFLSHLMYT YVNGKYIGNS GDQRKEVQIE APISLCQAVT 780 NISILSVMVG LWDSGPLMEK RRAGLTDVEI KCDDFAYNVT SNDWGYQVGF EGESLEIYTQ 840 ENSDRVEWDP ISRNADTSPK WFRTTFDAPL GDEPVALNLS SMGKGQAWVN GEGIGRYWLS 900 IKTKNGNPSQ TLYHVPREFL NPKDNLLVIQ EESRGDPFQI TLVTISTATM GKQTHSNYFI 960 G* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 2.0e-20 | 31 | 195 | 172 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 2.0e-111 | 30 | 305 | 277 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 7.0e-117 | 37 | 305 | 280 | + Glycosyl hydrolases family 35. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-128 | 306 | 589 | 299 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 306 | 950 | 679 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21611.1 | 0 | 306 | 950 | 56 | 710 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274012.1 | 0 | 26 | 305 | 57 | 329 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002274012.1 | 0 | 306 | 950 | 92 | 739 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307056.1 | 0 | 8 | 306 | 2 | 293 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307056.1 | 0 | 306 | 959 | 55 | 711 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 7e-35 | 307 | 585 | 39 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 4e-32 | 38 | 303 | 15 | 277 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.000001 | 653 | 929 | 298 | 570 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 5e-28 | 307 | 576 | 42 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-26 | 31 | 342 | 11 | 312 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
