| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10020877 |
| Family | GH35 |
| Protein Properties | Length: 648 Molecular Weight: 71944.4 Isoelectric Point: 8.7412 |
| Chromosome | Chromosome/Scaffold: 711 Start: 362874 End: 367696 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 137 | 274 | 3.6e-35 |
| AANMAVELQTGVPWVMCKQTDAPDPLINTCNGMRCGQTFSGPNSPSKPALWTENWTSFLQRFGDETYLRSAEDIAFHTLLFILAKNGSFINYYMYHGGTN FGRSGAAYMATSYYDQAPLDEYGLTREPKWSHLKEMHA | |||
| GH35 | 21 | 135 | 0 |
| LIINGERRMLFSGSIHYPRSTPQMWGSLIAKAKQGGVDVIETYVFWNLHEPQPGQYDFSGRNDIVKFIKDVQAQGLYVALRIGPFIESEWTYGGLPFWLH NIPGIVYRTDNQPFK | |||
| Full Sequence |
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| Protein Sequence Length: 648 Download |
| MVAVAATMVA GMNVTYDGRA LIINGERRML FSGSIHYPRS TPQMWGSLIA KAKQGGVDVI 60 ETYVFWNLHE PQPGQYDFSG RNDIVKFIKD VQAQGLYVAL RIGPFIESEW TYGGLPFWLH 120 NIPGIVYRTD NQPFKCAANM AVELQTGVPW VMCKQTDAPD PLINTCNGMR CGQTFSGPNS 180 PSKPALWTEN WTSFLQRFGD ETYLRSAEDI AFHTLLFILA KNGSFINYYM YHGGTNFGRS 240 GAAYMATSYY DQAPLDEYGL TREPKWSHLK EMHAAVKSCS STLLNGVKTI TSLGRFQQAY 300 VYEDSRATKG NCAAFLVNSG SQNAAVVFRN AKFELLPHSI SILPDCRNVV YSSGKASSGF 360 SNRRETISKI LDGRANRWEE FRDPIPSFFD SKIRFNQLEE QTGITNDLSD YLWYTLSFQP 420 NSTSSTAAKL RVRFLSHVMY AYVNGKYAGS AIGNSGTQKT AGQLEAPISL GQATNSISIL 480 SAMVGLWDSG AFLEKRRAGL TDVEIQCNNV SHNFTSHAWG YKVGFEGESL EIYAPKNTNR 540 VRWGPISSAV DTSPKWFRTT FDAPLGDKPV ALNLSSMGKG QAWVNGEGIG RYWVSIKTKK 600 GTPSQTLYHV PREFLNPKDN LLVIQEESTG NPFQITLVTI STITKME* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 2.0e-5 | 555 | 624 | 72 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 1.0e-16 | 16 | 120 | 107 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 7.0e-118 | 20 | 276 | 321 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 15 | 642 | 711 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21611.1 | 0 | 11 | 641 | 23 | 706 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274012.1 | 0 | 11 | 641 | 59 | 735 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002284529.1 | 0 | 15 | 642 | 25 | 698 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306647.1 | 0 | 13 | 646 | 1 | 672 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307056.1 | 0 | 9 | 641 | 20 | 700 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 9e-30 | 21 | 272 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0001 | 551 | 624 | 505 | 570 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 5e-24 | 12 | 259 | 9 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 5e-24 | 12 | 259 | 9 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 709 | 15 | 637 | 0 |
| HO780602 | 593 | 64 | 593 | 0 |
| HO795552 | 536 | 104 | 576 | 0 |
| HO795552 | 51 | 15 | 65 | 0 |
| HO795552 | 40 | 65 | 104 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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