| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10020888 |
| Family | CE8 |
| Protein Properties | Length: 698 Molecular Weight: 77330 Isoelectric Point: 7.8719 |
| Chromosome | Chromosome/Scaffold: 711 Start: 436643 End: 454493 |
| Description | Transducin/WD40 repeat-like superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 399 | 679 | 0 |
| GRYTKIQEAVDAAPSNLVEKRFVIHIKDGVYEEIVRIPFEKKNVVFLGDGMGITVITGNLAVGHQPGVTTYDSATVGTIWRFQTPLNCSGRWVHGNKPDN TKHSDLSMLENCEFLGNQDTLYAHSLRQYYKSCRITGNVDFIFGNAAAVFLDCLIQLVPLLDKPESGGQLAITAQGRTDPAQSTGFVFLALFDKEPSVHK KYLGRAWKEYSRAVFINCEMGSVVSEEGWVPWNGEYGLNTLYYGEFGNHGDGCDRGKRVKWSSQVPEEHLDSYSLQSFIQG | |||
| Full Sequence |
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| Protein Sequence Length: 698 Download |
| MKGGTVQINW HDMKPVLSVD FHSISGLLAT GGADYDIKLW LISPAEPEKK TPTATYQNSL 60 SYHGSAVNVL RFSPCGELLA SGADGGELII WKSQATESGR ASVWKVLKNL TFHRKDVLDM 120 EWSGDSAFLI SGSVDNSCII WDINKGCVHQ MLDGHLHYVQ GVAWDPLGKY VASLSSDRTC 180 RVYARKTQPK SKGLEKPYVC QHVITKAEQQ AKDDSKSTKT HLFLDETLAS FFRRLAWSPD 240 GSFLVAPAGS YKISPSSETL NTAYVFSRKD LPALMLPGAS KPVIAVRFCP VQFTLRGTNS 300 GTNILRWLPI PHYYEQRKKE DLKANYHPIL NYAAGLFKLP YRLIFAVATL NSVYIYDTES 360 VPPIAVLAGL HYAAITDIAW SANGELLAVS SQDGYCTLGR YTKIQEAVDA APSNLVEKRF 420 VIHIKDGVYE EIVRIPFEKK NVVFLGDGMG ITVITGNLAV GHQPGVTTYD SATVGTIWRF 480 QTPLNCSGRW VHGNKPDNTK HSDLSMLENC EFLGNQDTLY AHSLRQYYKS CRITGNVDFI 540 FGNAAAVFLD CLIQLVPLLD KPESGGQLAI TAQGRTDPAQ STGFVFLALF DKEPSVHKKY 600 LGRAWKEYSR AVFINCEMGS VVSEEGWVPW NGEYGLNTLY YGEFGNHGDG CDRGKRVKWS 660 SQVPEEHLDS YSLQSFIQGF NFKAIKFSTS QHKIATL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 5.0e-69 | 399 | 679 | 308 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 4.0e-70 | 391 | 679 | 322 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-70 | 389 | 659 | 295 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 6.0e-105 | 388 | 679 | 315 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 3.0e-134 | 399 | 679 | 303 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG30285.1 | 0 | 1 | 401 | 1 | 367 | AF308859_1 FAS2 [Glycine max] |
| RefSeq | NP_568990.1 | 0 | 1 | 408 | 1 | 379 | FAS2 (FASCIATA 2); nucleotide binding / protein binding [Arabidopsis thaliana] |
| RefSeq | NP_974991.1 | 0 | 1 | 401 | 1 | 370 | FAS2 (FASCIATA 2); nucleotide binding / protein binding [Arabidopsis thaliana] |
| RefSeq | XP_002274967.1 | 0 | 1 | 401 | 1 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002517246.1 | 0 | 1 | 401 | 1 | 368 | chromatin assembly factor I P60 subunit, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 399 | 659 | 17 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 388 | 659 | 5 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3emh_A | 0.000000000001 | 45 | 187 | 10 | 144 | B Chain B, Structural Basis Of Wdr5-Mll Interaction |
| PDB | 3emh_A | 0.00000001 | 14 | 183 | 30 | 182 | B Chain B, Structural Basis Of Wdr5-Mll Interaction |
| PDB | 3emh_A | 0.005 | 16 | 183 | 116 | 314 | B Chain B, Structural Basis Of Wdr5-Mll Interaction |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DT563750 | 302 | 1 | 299 | 0 |
| DW167449 | 272 | 1 | 271 | 0 |
| EL434817 | 267 | 1 | 266 | 0 |
| EL590326 | 269 | 1 | 268 | 0 |
| GE602531 | 271 | 2 | 271 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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