Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10020966 |
Family | GH3 |
Protein Properties | Length: 778 Molecular Weight: 83802 Isoelectric Point: 6.5466 |
Chromosome | Chromosome/Scaffold: 3 Start: 249666 End: 253214 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 89 | 338 | 0 |
NVDRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNTSLFQAIGKVVSTEARAMHNVGLAGLTFWSPNINILRDPRWGRAQETPGE DPLLTSKYATAYVKGLQQRDDGDEDRLKVAACCKHYTAYDVDNWKGVDRYHFNAIVTKQDMDDTFQPPFKSCVTEGNVASVMCSYNQVNGVPTCADPDLL AGVIRGQWKLNGYIVSDCDSLDVYYKSQHYTKTPEEAAAKAILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 778 Download |
MAAHPPFPNR GFRSRAVVFL FLILVVINGS VVVVRAQNPV FACDVAKTPS LASLGFCNGS 60 ISVTERVADL VGRLTLPEKI TFLVNSAGNV DRLGIPKYEW WSEALHGVSY VGPGTHFSNV 120 VPGATSFPQV ILTAASFNTS LFQAIGKVVS TEARAMHNVG LAGLTFWSPN INILRDPRWG 180 RAQETPGEDP LLTSKYATAY VKGLQQRDDG DEDRLKVAAC CKHYTAYDVD NWKGVDRYHF 240 NAIVTKQDMD DTFQPPFKSC VTEGNVASVM CSYNQVNGVP TCADPDLLAG VIRGQWKLNG 300 YIVSDCDSLD VYYKSQHYTK TPEEAAAKAI LAGLDLNCGS FLGQHTEAAV IAGLVDESAI 360 NNAISNNFAT LMRLGFFDGD PRTQLYGKLG PKDVCTEENQ ELAREAARQG IVLLKNNAAS 420 LPLSPTTIKN LAVIGPNANV TKTMIGNYEG TPCKYTTPLQ GLSASVATTY VAGCQNVACG 480 TAELDEAKKA ASSADATILV MGTDLSIEAE SLDRTDLTLP GQQQDLVTQV ASVSKGPVIL 540 VIMSGGGIDV SFAKSSDQIS TILWVGFPGE AGGDAIADVI FGHFNPSGRL PMSWYPQSYA 600 DKVSMTNMNM RPDNSTGYPG RTYRFYTGET VYTFGDGLSY SQFTHKLIRA PKSVSIQLRP 660 DHVCHSSECQ SVDAADDICS SGTILDVHLR VRNRGRMQGS HTVFLFSSPP AVHNSPRKHL 720 LGFEKVGLEG RGEAVAKFKV DLCKDLSLVD EFGNRKVALG EHLLHVGDLK HSFTVGI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-56 | 411 | 641 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 4.0e-57 | 92 | 474 | 390 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-59 | 70 | 357 | 295 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 8.0e-67 | 125 | 741 | 662 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 38 | 777 | 758 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 33 | 777 | 31 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 33 | 777 | 223 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 38 | 777 | 1 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303181.1 | 0 | 18 | 777 | 15 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 33 | 777 | 33 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 125 | 740 | 91 | 696 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 3u48_A | 0 | 125 | 740 | 91 | 696 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 3u4a_B | 0 | 125 | 740 | 91 | 696 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 3u4a_A | 0 | 125 | 740 | 91 | 696 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 2x41_A | 8e-38 | 65 | 776 | 2 | 714 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |