Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10021863 |
Family | AA1 |
Protein Properties | Length: 467 Molecular Weight: 52235.6 Isoelectric Point: 8.768 |
Chromosome | Chromosome/Scaffold: 164 Start: 385294 End: 387778 |
Description | SKU5 similar 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 45 | 417 | 0 |
GGGFGGLGINSRELIPIPYDIPEDDYTVIINDWYPKSHTALKNLLDSGRTLGKPEAVLINGQIAKGDGSDVPLFTMKAGKTYKYRICNAGLKTSLNFRIQ GHTMKLVEMEGSHVVQNYYQSLDVHVGQCMAVLVTADQPGNKDYVMVASTRFTKGYVRVGKGIVRYEGSNGVVSSEPIPDAPVGWAWSLNQFRSLRWNLT SNAARPNPQGSYHYGQIEITRTIKLVNSAGLVNGKLRYAINGVSHVDGATPLKLAEYFGISDMVFKYDTIPDMPKNDDNVKIVVQPDVLNLTFRNFVEIV FENHEKSIQSWHLDGYSFFTVGSEPGVWGPEKRKNYNLLDAVSRTTVQVFPKSWAAIMLTFDNAGMWNIRSEM |
Full Sequence |
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Protein Sequence Length: 467 Download |
MKFFISLKSK ECLFFSNRSD FKLKAFSDSV WTTCHDIRKS LTWAGGGFGG LGINSRELIP 60 IPYDIPEDDY TVIINDWYPK SHTALKNLLD SGRTLGKPEA VLINGQIAKG DGSDVPLFTM 120 KAGKTYKYRI CNAGLKTSLN FRIQGHTMKL VEMEGSHVVQ NYYQSLDVHV GQCMAVLVTA 180 DQPGNKDYVM VASTRFTKGY VRVGKGIVRY EGSNGVVSSE PIPDAPVGWA WSLNQFRSLR 240 WNLTSNAARP NPQGSYHYGQ IEITRTIKLV NSAGLVNGKL RYAINGVSHV DGATPLKLAE 300 YFGISDMVFK YDTIPDMPKN DDNVKIVVQP DVLNLTFRNF VEIVFENHEK SIQSWHLDGY 360 SFFTVGSEPG VWGPEKRKNY NLLDAVSRTT VQVFPKSWAA IMLTFDNAGM WNIRSEMWER 420 TYLGQQMYVS VLSPERSLRD EYNMPESSML CGLVAGLPKP APYSGT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 4.0e-132 | 53 | 454 | 413 | + copper ion binding / pectinesterase | ||
PLN02792 | PLN02792 | 9.0e-142 | 53 | 452 | 403 | + oxidoreductase | ||
PLN02991 | PLN02991 | 2.0e-152 | 53 | 462 | 410 | + oxidoreductase | ||
PLN02835 | PLN02835 | 5.0e-157 | 53 | 456 | 405 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 53 | 465 | 413 | + copper ion binding / oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002297609.1 | 0 | 44 | 464 | 134 | 552 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002299087.1 | 0 | 44 | 464 | 134 | 550 | hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] |
RefSeq | XP_002303974.1 | 0 | 44 | 464 | 134 | 552 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523381.1 | 0 | 40 | 464 | 130 | 550 | multicopper oxidase, putative [Ricinus communis] |
RefSeq | XP_002523382.1 | 0 | 44 | 464 | 134 | 550 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 4e-31 | 44 | 455 | 112 | 542 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asq_A | 4e-31 | 44 | 455 | 112 | 542 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_B | 4e-31 | 44 | 455 | 112 | 542 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1asp_A | 4e-31 | 44 | 455 | 112 | 542 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1aso_B | 4e-31 | 44 | 455 | 112 | 542 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG074541 | 321 | 147 | 467 | 0 |
JG074886 | 309 | 159 | 467 | 0 |
JG076155 | 306 | 162 | 467 | 0 |
JG074659 | 305 | 163 | 467 | 0 |
JG075857 | 304 | 164 | 467 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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