| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10021888 |
| Family | GH47 |
| Protein Properties | Length: 596 Molecular Weight: 66270.8 Isoelectric Point: 5.1626 |
| Chromosome | Chromosome/Scaffold: 164 Start: 475908 End: 481434 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 49 | 301 | 0 |
| MFYHAFDGYMNNAFPLDELKPLSCQGEDSLGGYALTLIDSLDTLALLGDRERVTSSVDWIGKNLRFDINKTVSVFETSIRVLGGLLSAHLIASDYATGMR IPSYDNQLLNLAEDLGRRMLPAFVTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKSVRGLWARRSRLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLFIFQEAYAAAMKYLFNDP | |||
| GH47 | 303 | 456 | 0 |
| LQAFWPGLQVLAGDINPAIRTHDAFFSVWRRYGFTPEGFNLATITVQSGQKSYPLRPELIESTYWLYKATRDPRYLDVGRDMVASLQYGARCPCGYCHIT DVESHQIEDHMESFFLAETVKYLWLLFDLASGADNLVENGPYKYIFSTEGHLLP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 596 Download |
| MAAGRRSLNR SLLLHLLLQF LVLLFLPSAL ADGVSSLEAK HLRDEVREMF YHAFDGYMNN 60 AFPLDELKPL SCQGEDSLGG YALTLIDSLD TLALLGDRER VTSSVDWIGK NLRFDINKTV 120 SVFETSIRVL GGLLSAHLIA SDYATGMRIP SYDNQLLNLA EDLGRRMLPA FVTPTGIPFG 180 SVNLLHGVDE HESKITSTAG GGTLTLEFGV LSRLTNDPIF EQVTKKSVRG LWARRSRLNL 240 VGAHINVFTG EWTQKDAGIG TSIDSFYEYL LKAYLLFGDE EYLFIFQEAY AAAMKYLFND 300 PCLQAFWPGL QVLAGDINPA IRTHDAFFSV WRRYGFTPEG FNLATITVQS GQKSYPLRPE 360 LIESTYWLYK ATRDPRYLDV GRDMVASLQY GARCPCGYCH ITDVESHQIE DHMESFFLAE 420 TVKYLWLLFD LASGADNLVE NGPYKYIFST EGHLLPATPQ IALIREHCSY FGAYCKSSNV 480 KQESSRSETS NNHEANSSTS YGNWIHRGYS SDSSSFVESL NPSVGLIKGL CPGLTHGQRY 540 GISYVDSTEK IPTSPAPEKE IVADNPPLIL ISDLNAGNSM SFRGDDDAQK SRQEE* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 6.0e-76 | 43 | 460 | 474 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 4.0e-162 | 49 | 456 | 461 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26354.1 | 0 | 32 | 550 | 28 | 595 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199184.1 | 0 | 29 | 573 | 27 | 573 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002280131.1 | 0 | 32 | 550 | 28 | 562 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311656.1 | 0 | 31 | 576 | 1 | 564 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517026.1 | 0 | 18 | 593 | 9 | 607 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x9d_A | 0 | 26 | 456 | 73 | 533 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1fmi_A | 0 | 46 | 456 | 14 | 455 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo3_A | 0 | 46 | 456 | 14 | 455 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1fo2_A | 0 | 46 | 456 | 14 | 455 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1nxc_A | 0 | 25 | 456 | 1 | 464 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
