Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10022374 |
Family | GH3 |
Protein Properties | Length: 774 Molecular Weight: 84994.6 Isoelectric Point: 6.7843 |
Chromosome | Chromosome/Scaffold: 38 Start: 125576 End: 129741 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 72 | 326 | 0 |
AAIPRLDIPAYEWWSEALHGVAFARGIHFNGTISKATSFPQVILTAASFDAYQWYRIGQVVGKEARALYNSGQASGLTFWAPNINIFRDPRWGRGQETPG EDPFITGKYAVSFVRGVQGDSFHGDAKLKGHLQASACCKHFTAYDLDNWKGVNRFLFDARVTQQDMADTYQPPFQSCVKQGRASGIMCAYNRVNGVPSCA DYNLLSKTVRAEWGFHGYITSDCDAVSIIHDAQGYAKQPEDAVADVLKAGMDMDC |
Full Sequence |
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Protein Sequence Length: 774 Download |
MDSTKLIFFI LLFLLQPFSS FQQQPAFSCG PSTSSSVLPF CNPKLPIRER AIDLVSRLTL 60 DEKISQLVNS AAAIPRLDIP AYEWWSEALH GVAFARGIHF NGTISKATSF PQVILTAASF 120 DAYQWYRIGQ VVGKEARALY NSGQASGLTF WAPNINIFRD PRWGRGQETP GEDPFITGKY 180 AVSFVRGVQG DSFHGDAKLK GHLQASACCK HFTAYDLDNW KGVNRFLFDA RVTQQDMADT 240 YQPPFQSCVK QGRASGIMCA YNRVNGVPSC ADYNLLSKTV RAEWGFHGYI TSDCDAVSII 300 HDAQGYAKQP EDAVADVLKA GMDMDCGLYL QQHSKTAVEQ GKLPVSQIDR ALHNLFALRM 360 RLGLFNGDPK EQVFGNIGPD QVCSQEHQML ALEVARNGIV LLKNSGRLLP LHKSESGSIA 420 VIGPNADPGR TLLGNYAGPP CTLITPLQGL QAYVKDTTYI QGCENVQCSS ADIEQAVKTA 480 QGADHVILVM GLDQTQEREE LDRVDLILPG MQQELITRVA RAAKNPVVLV LLSGGPIDVS 540 FAKYDNKIGS ILWAGYPGQA GGTALAEIIF GDHNPGGRLP VTWYPQEFVK VPMTDMRMRP 600 ESSSSYPGRT YRFYKGRSVF EFGHGLSYSK YSYELKHVSQ DKLYLNQSSS MSVHTVDKSD 660 SVRSMLVSNL GAEFCEQSEF AVRVEVENQG EMAGKHPVLL FARQGKHGNG RPRKQLVGFK 720 SVVLSAGEKG EVEFLVSPCE HLSRANEDGL MVIEEGTHFL AVGGDQHPID VML* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 6.0e-53 | 69 | 464 | 402 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-67 | 399 | 629 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 2.0e-69 | 59 | 351 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-87 | 53 | 738 | 772 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 26 | 771 | 759 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI19138.1 | 0 | 10 | 772 | 674 | 1410 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002285805.1 | 0 | 1 | 773 | 3 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302285.1 | 0 | 24 | 773 | 25 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 773 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 773 | 1 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 108 | 769 | 91 | 728 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 3u48_A | 0 | 108 | 769 | 91 | 728 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 3u4a_B | 0 | 108 | 769 | 91 | 728 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 3u4a_A | 0 | 108 | 769 | 91 | 728 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 4i3g_B | 5.04467e-44 | 50 | 452 | 53 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |