Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10022413 |
Family | GH3 |
Protein Properties | Length: 659 Molecular Weight: 72528.5 Isoelectric Point: 9.4143 |
Chromosome | Chromosome/Scaffold: 38 Start: 402356 End: 406835 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 130 | 367 | 0 |
LSTPLAIPMLYGIDAVHGHNYAYKATIFPHNIGLGVTRDLDLVKRIGAATAAEIRATGVRYAFSPTIAVCRDPRWGRCFESYSEDPSIVRQMTEIIPGLQ GDIPHNSNHGVPFINARDKTKVVACAKHYVGDGGTVKGIDRNNTVITWDGLMKIHMLPYLDAIYKGVATVMISYSSWNGKKMHANRKLVTSFLKDKLKFR GFVVSDWLGVDRITTPEHANYSKSIQTALKAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 659 Download |
MASSSLYSMF TLLIIILFGA TTTAAADRNP RTTRSVDGGY LKYKDPKQPI KARIRDLMAR 60 MTLAEKIGQM VQIDRPVATE DAMRKYFIGS VVSVFTSLPD ILPTQPQPAH NNITVGRWVY 120 TINKIQNAAL STPLAIPMLY GIDAVHGHNY AYKATIFPHN IGLGVTRDLD LVKRIGAATA 180 AEIRATGVRY AFSPTIAVCR DPRWGRCFES YSEDPSIVRQ MTEIIPGLQG DIPHNSNHGV 240 PFINARDKTK VVACAKHYVG DGGTVKGIDR NNTVITWDGL MKIHMLPYLD AIYKGVATVM 300 ISYSSWNGKK MHANRKLVTS FLKDKLKFRG FVVSDWLGVD RITTPEHANY SKSIQTALKA 360 GIDMVMVPYG FREFIKELTY KVESRIIPMW RIDDAVSRIL RVKFTMGLFE TPLADLTMAR 420 ELGKKEHREL AREAVRKSLV LLKNGKPGGE PLLPLQKKGA PKILVAGSHA HNLGLQCGGW 480 TITWQGQSGN NITSGTTILE GVSNTVDPST EVVHKENPDV NFSRSNNFSY GIVVVGEQNY 540 AEYFGDSFNL TIPDDGLAAI DNVCGAVRCV VILVTGRPVV IQHHVDKIDA LVAAWLPGSE 600 GGQGVADVLF GDYGFTGKLA RTWFKSVDQL PMNVGDSHYD PLYPFGYGLT TEPTYATN* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 8.0e-40 | 122 | 650 | 591 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-48 | 439 | 650 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-79 | 46 | 650 | 683 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 7.0e-82 | 61 | 508 | 458 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 7.0e-85 | 62 | 402 | 345 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 40 | 655 | 25 | 626 | beta-D-glucosidase [Gossypium hirsutum] |
EMBL | CBI39076.1 | 0 | 40 | 656 | 25 | 635 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002266470.1 | 0 | 40 | 656 | 25 | 627 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313632.1 | 0 | 40 | 653 | 25 | 624 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523935.1 | 0 | 40 | 653 | 29 | 629 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 40 | 654 | 2 | 602 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 1x38_A | 0 | 40 | 654 | 2 | 602 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 1lq2_A | 0 | 40 | 654 | 2 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 40 | 654 | 2 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 40 | 654 | 2 | 602 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |