Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10022645 |
Family | GH35 |
Protein Properties | Length: 872 Molecular Weight: 97000.3 Isoelectric Point: 8.2032 |
Chromosome | Chromosome/Scaffold: 59 Start: 333024 End: 337659 |
Description | beta-galactosidase 10 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 354 | 0 |
LLIDGQRKLFISASIHYPRSVPAMWPGLVQTAKEGGVDVIETYVFWNGHEIAPSVYNFDGRYDLVKFVKIVQNAGMHLILRIGPFVAAEWNYGGVPVWLH YIPGTVFRTDNKNFKFYMQRFMTYIVNLMKKEKLFASQGASSSSLDWDASSLQVENEYGYYEQFYGEGGKRYYGEGGEGYAMWSAQMAVAQNIGVPWIMC QQFDAPDPVIDTCNGFYCDAFKPISPHRPKIWTENWPGWFQLFGAPNPHRPAQDVAYAVARFFQKGGTVNNYYMYHGGTNFGRTAGGPFITTSYDYEAPI DEYGMPNQPKWGHLRDLHK |
Full Sequence |
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Protein Sequence Length: 872 Download |
MEKLFSFFFF FSSCLLLFFF FEVGSAGNVT YDGRSLLIDG QRKLFISASI HYPRSVPAMW 60 PGLVQTAKEG GVDVIETYVF WNGHEIAPSV YNFDGRYDLV KFVKIVQNAG MHLILRIGPF 120 VAAEWNYGGV PVWLHYIPGT VFRTDNKNFK FYMQRFMTYI VNLMKKEKLF ASQGASSSSL 180 DWDASSLQVE NEYGYYEQFY GEGGKRYYGE GGEGYAMWSA QMAVAQNIGV PWIMCQQFDA 240 PDPVIDTCNG FYCDAFKPIS PHRPKIWTEN WPGWFQLFGA PNPHRPAQDV AYAVARFFQK 300 GGTVNNYYMY HGGTNFGRTA GGPFITTSYD YEAPIDEYGM PNQPKWGHLR DLHKAIKLCE 360 KMLLTSNSIN SSLGHSQEAE VYEDGSGACV AFLSNTDDKN DVTVTFRNAS YHLPAWSVSI 420 LPDCKNEVYN TAKVTSQATV VKMVSENLRP SVQSSKKDAR TPNWEVFVEK AGIWGEADLV 480 KNGLDDHINT TKDASDYLWY TTSFTYGEDE ALLKQGRSPV LLIDSKGHAL HVFVNGQLQG 540 SASGNGTVFP FKYKKPITLK AGKNEISLLS ITVGLPTAGP RYEWIPAGLT YVKIQGLNNG 600 TVDLSKNKWT YKIGLEGEKL AIYTPGGMNR VHWVATPNVP KMQPLTWYKA AVEPPTGNEP 660 IGLDMLNMGK GLAWLNGEEI GRYWPRKSPK NGKCVDECDY RGKFMPDKCL TGCGKPTQRW 720 YHIPRSWFKP SGNVLVIFEE KGGDPSKIKF SKRRTSGVCA AVSEDYPSYN LVPQAGNATS 780 KTASVHLKCP EDTQISAVKF ASFGTPKGTC GSYKIGDCHD PNSISAVEKE CLKRNECSIE 840 VSEEKFMSKG SCKVGGGATM KKKLAVEVVC S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 2.0e-10 | 29 | 135 | 109 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 1.0e-13 | 787 | 870 | 87 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 9.0e-132 | 35 | 356 | 334 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 28 | 871 | 847 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF70823.1 | 0 | 28 | 871 | 45 | 870 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
DDBJ | BAD91080.1 | 0 | 28 | 871 | 28 | 851 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CBI21600.1 | 0 | 26 | 871 | 20 | 847 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002310540.1 | 0 | 5 | 871 | 3 | 827 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522927.1 | 0 | 27 | 871 | 27 | 803 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-34 | 25 | 352 | 4 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-31 | 29 | 339 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-31 | 29 | 339 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |