| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10022903 |
| Family | AA3 |
| Protein Properties | Length: 751 Molecular Weight: 81665.9 Isoelectric Point: 7.9709 |
| Chromosome | Chromosome/Scaffold: 8 Start: 677804 End: 680703 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 225 | 746 | 1.54143e-44 |
| VESLSEKGVRVTDQQDDILKIECDAVIVGSGCGGGVAAAVLARSGLKVIVLEKGNYFAPEDYSSLEGPSLAELYEHGGMLATTNGKTIILAGSTVGGGSA VNWSACIKTPDSVLKDWSQKLLIFGSLEYKEAMDTVWKRLGVTEECKQEGFQNQVLRKGCEKLGLKVDPVSRNSSEDHYCGSCCYGCKTGDKKGTDTTWL VDAVDNGGLIVTGCKAERFVLRNDESGKRKRCLGVIARSSNPKLLNKTLMIEAKVTVSACGALLTPPLMISSGLKNPNIGKNLHLHPVLMAWGYFPESSD LKGKVYEGGIITSIHKVVTEESSKNTIAIIETSSLGPACYAAVFPWTSGLELKEKMIKYPRTAVLFALVRDIGSGKVKVEGRVSHRLDKVDKENLRTGLR QALRILVAAGAAEVGTLRSDGQRFRCEGTKEKDFEAFIDGVGVSGGLKSGGNQWTMFSSAHQMGSCRMGQTEEDGGVDENGESWEAKGLFVCDASVLPSA VGVNPMITIQSTALCIANKIAA | |||
| Full Sequence |
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| Protein Sequence Length: 751 Download |
| MEEETECHTL LRGGRRSNGG SYSHGMGSGQ IQSLSAICEA LIPPLTLPEN TTTGMPLDTH 60 QHQQKKEALV SFYGASGSQP PIPHEVAEIM VKRGLSEGVL IVKLVLKMLS FRLGTLLLCG 120 FCSLDWKWPF LRNFSEISID KRQQLLRKWS EEKLIIPLRV VFAFIKFFCL FIFFSRVDEG 180 LKNPAWEAIG YEVDSRESQR KQKGERPLQK GIVETTTYQD KTELVESLSE KGVRVTDQQD 240 DILKIECDAV IVGSGCGGGV AAAVLARSGL KVIVLEKGNY FAPEDYSSLE GPSLAELYEH 300 GGMLATTNGK TIILAGSTVG GGSAVNWSAC IKTPDSVLKD WSQKLLIFGS LEYKEAMDTV 360 WKRLGVTEEC KQEGFQNQVL RKGCEKLGLK VDPVSRNSSE DHYCGSCCYG CKTGDKKGTD 420 TTWLVDAVDN GGLIVTGCKA ERFVLRNDES GKRKRCLGVI ARSSNPKLLN KTLMIEAKVT 480 VSACGALLTP PLMISSGLKN PNIGKNLHLH PVLMAWGYFP ESSDLKGKVY EGGIITSIHK 540 VVTEESSKNT IAIIETSSLG PACYAAVFPW TSGLELKEKM IKYPRTAVLF ALVRDIGSGK 600 VKVEGRVSHR LDKVDKENLR TGLRQALRIL VAAGAAEVGT LRSDGQRFRC EGTKEKDFEA 660 FIDGVGVSGG LKSGGNQWTM FSSAHQMGSC RMGQTEEDGG VDENGESWEA KGLFVCDASV 720 LPSAVGVNPM ITIQSTALCI ANKIAASFKK * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.008 | 596 | 746 | 155 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| PRK02106 | PRK02106 | 0.006 | 685 | 745 | 61 | + choline dehydrogenase; Validated | ||
| COG2303 | BetA | 2.0e-18 | 267 | 746 | 552 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 2.0e-20 | 606 | 740 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| pfam00732 | GMC_oxred_N | 9.0e-78 | 295 | 512 | 223 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 22 | 750 | 1 | 718 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 6 | 750 | 4 | 737 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 2 | 750 | 4 | 748 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002272123.1 | 0 | 3 | 750 | 8 | 725 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002529832.1 | 0 | 1 | 750 | 1 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.000001 | 232 | 748 | 4 | 520 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 2gew_A | 0.005 | 685 | 737 | 442 | 489 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 1n4w_A | 0.005 | 685 | 737 | 442 | 489 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 1n4v_A | 0.005 | 685 | 737 | 442 | 489 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 1n4u_A | 0.005 | 685 | 737 | 442 | 489 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 752 | 2 | 746 | 0 |
| HO779224 | 442 | 224 | 659 | 0 |
| EX275136 | 294 | 451 | 743 | 0 |
| HO811216 | 327 | 427 | 748 | 0 |
| EL893058 | 291 | 423 | 711 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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