| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10023226 |
| Family | CBM43 |
| Protein Properties | Length: 448 Molecular Weight: 49619.5 Isoelectric Point: 8.8598 |
| Chromosome | Chromosome/Scaffold: 98 Start: 111711 End: 113132 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 358 | 441 | 1.6e-27 |
| WCVVARGADMRSLGRELSYACSHGNRTCEALEPGKECYEPVSLIWHASYAFSSYWTQFRSQGATCHFNGLAVQTTRNPGHGSCH | |||
| GH17 | 8 | 331 | 0 |
| IGINYGRLGNDLPTPFRSIELIKSMQVSSVKLYDPNQEILKLLAGTKIQVSVTVPNQEIIGISQNRSLAVKWVRDNVLAYYPGTMIRFVLVGNEVLSRSS AEDMQIWNHLVPAMSKIKNIIKSHNILNIKVGTPLAMDVLQNTSPPTNATFRSDISFTVMPQLLKFLNSTKSFFFINAYPYFPWSENPTSSALDFALFQS KSNYTDPGSGLVYNNLLDQMLDSLFFAMNKLGYPDIRVSISETGWPHAGDIDQPGANTHNAAIYNRNVIRKMTAKPPIGTPAKPGVAIPTFIFSLYDENG KKGPGTERHWGLLRPDGTAIYDID | |||
| Full Sequence |
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| Protein Sequence Length: 448 Download |
| MGTDVPNIGI NYGRLGNDLP TPFRSIELIK SMQVSSVKLY DPNQEILKLL AGTKIQVSVT 60 VPNQEIIGIS QNRSLAVKWV RDNVLAYYPG TMIRFVLVGN EVLSRSSAED MQIWNHLVPA 120 MSKIKNIIKS HNILNIKVGT PLAMDVLQNT SPPTNATFRS DISFTVMPQL LKFLNSTKSF 180 FFINAYPYFP WSENPTSSAL DFALFQSKSN YTDPGSGLVY NNLLDQMLDS LFFAMNKLGY 240 PDIRVSISET GWPHAGDIDQ PGANTHNAAI YNRNVIRKMT AKPPIGTPAK PGVAIPTFIF 300 SLYDENGKKG PGTERHWGLL RPDGTAIYDI DLTGSRTDSE YRALPEGRNN MAYKGKVWCV 360 VARGADMRSL GRELSYACSH GNRTCEALEP GKECYEPVSL IWHASYAFSS YWTQFRSQGA 420 TCHFNGLAVQ TTRNPGHGSC HFPNVTV* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-13 | 358 | 429 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 8.0e-29 | 358 | 442 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-99 | 8 | 331 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64490.1 | 0 | 8 | 447 | 37 | 476 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| GenBank | ABK28569.1 | 0 | 8 | 447 | 37 | 476 | unknown [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 6 | 447 | 27 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002298669.1 | 0 | 8 | 447 | 23 | 462 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520622.1 | 0 | 8 | 400 | 28 | 420 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 8 | 332 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 8 | 332 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 8 | 332 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_B | 0 | 8 | 332 | 3 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_A | 0 | 8 | 332 | 3 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX051579 | 288 | 161 | 448 | 0 |
| EX050956 | 294 | 154 | 447 | 0 |
| EX050461 | 271 | 158 | 428 | 0 |
| ES816855 | 272 | 178 | 448 | 0 |
| DT737283 | 271 | 181 | 448 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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