Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10023245 |
Family | CBM43 |
Protein Properties | Length: 448 Molecular Weight: 49406.5 Isoelectric Point: 5.415 |
Chromosome | Chromosome/Scaffold: 98 Start: 184396 End: 185739 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 361 | 443 | 1.4e-25 |
WCMAKEGADEGALQRNIDYVCGTSASMGSYWCAPIQEGRECFLPNTVRAHASFAMNAFYQAMGRNDYDCEFRQTGEITTVDPR | |||
GH17 | 26 | 342 | 0 |
IGVNYGTAADDLPPPSDVARFLLQSTLINRVRIFEPDPELIRAFAHTGIRLTLTIPNHQIPNLTNFTFAQQWLDSFVVPFLPPTNIVRILVGNEVLSTAN KLLIDSLVPAMQTLHAALVRSLLDRRIQISTPHSLGILSDSTPPSAGKFHRGYDVHILKPLLTFLRDTNSSFMINPYPFFGCCSDIASLDYALFRPNPGV LDENTKLRYTNMLDAQLDAVFSALKSLGFTDLEIVIAETGWPSSGDPSQIGVGTEKAALFNRNLIQHVNSGVGTPLMPNRSFETYIFALFNEDQKPGPAC ERSFGLFNPDLSPVYDI |
Full Sequence |
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Protein Sequence Length: 448 Download |
MATNPQTFLT CLFILIPLIS DAEASIGVNY GTAADDLPPP SDVARFLLQS TLINRVRIFE 60 PDPELIRAFA HTGIRLTLTI PNHQIPNLTN FTFAQQWLDS FVVPFLPPTN IVRILVGNEV 120 LSTANKLLID SLVPAMQTLH AALVRSLLDR RIQISTPHSL GILSDSTPPS AGKFHRGYDV 180 HILKPLLTFL RDTNSSFMIN PYPFFGCCSD IASLDYALFR PNPGVLDENT KLRYTNMLDA 240 QLDAVFSALK SLGFTDLEIV IAETGWPSSG DPSQIGVGTE KAALFNRNLI QHVNSGVGTP 300 LMPNRSFETY IFALFNEDQK PGPACERSFG LFNPDLSPVY DIGILRPMVS RRSSENSPAK 360 WCMAKEGADE GALQRNIDYV CGTSASMGSY WCAPIQEGRE CFLPNTVRAH ASFAMNAFYQ 420 AMGRNDYDCE FRQTGEITTV DPRLCKP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.006 | 255 | 335 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 7.0e-17 | 360 | 431 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-31 | 360 | 442 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-89 | 26 | 342 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI23036.1 | 0 | 23 | 446 | 21 | 457 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271991.1 | 0 | 23 | 445 | 21 | 478 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318439.1 | 0 | 19 | 446 | 25 | 462 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321390.1 | 0 | 25 | 442 | 1 | 418 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526252.1 | 0 | 12 | 444 | 17 | 467 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 26 | 342 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 26 | 342 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 26 | 342 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 26 | 342 | 3 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 26 | 342 | 3 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |