y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10023309 |
Family | GH17 |
Protein Properties | Length: 412 Molecular Weight: 44931.8 Isoelectric Point: 4.9785 |
Chromosome | Chromosome/Scaffold: 98 Start: 465656 End: 467484 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 22 | 338 | 0 |
LGINYGQLGNNLPQPSTAVDLLTSLRITKARIYDTNPQILTAFANSQIDLIVTVENQMLSTLMDPQQALQWVTAHVKPYVRSTRITGIAVGNEVFTDDDD TLLNYLVPAMVNIHSALVQLGINRNIEVSTPHSLAVLETSYPPSAGEFKSEVAPDMTKFLQFLNATNSPFWINAYTYFAYKDDPTGISLDYVLFNPNPGM DDPSTGLHYDNMLYAQVDAVIFAISKLGYGGIEVRVSETGWPSNGDADEVGATVQNAASYNRNLLRRQLANQGTPLRPRARLEVYLFALFNEDMKPGPTS ERNYGLYQPDCSMVYNV |
Full Sequence |
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Protein Sequence Length: 412 Download |
MDATFINFIF LFSTLVGSVA SLGINYGQLG NNLPQPSTAV DLLTSLRITK ARIYDTNPQI 60 LTAFANSQID LIVTVENQML STLMDPQQAL QWVTAHVKPY VRSTRITGIA VGNEVFTDDD 120 DTLLNYLVPA MVNIHSALVQ LGINRNIEVS TPHSLAVLET SYPPSAGEFK SEVAPDMTKF 180 LQFLNATNSP FWINAYTYFA YKDDPTGISL DYVLFNPNPG MDDPSTGLHY DNMLYAQVDA 240 VIFAISKLGY GGIEVRVSET GWPSNGDADE VGATVQNAAS YNRNLLRRQL ANQGTPLRPR 300 ARLEVYLFAL FNEDMKPGPT SERNYGLYQP DCSMVYNVGL TSGRLGATNN AAATAVSTPG 360 THGGGGASPH SFFFLSSSAT KEVNIGYRQC LMYLTFAYTV FSQVIGTIRR P* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.007 | 211 | 331 | 124 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-91 | 22 | 338 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52058.1 | 0 | 4 | 344 | 22 | 358 | AC022455_12 beta-1,3-glucanase precursor, putative; 75043-73120 [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 1 | 339 | 1 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306003.1 | 0 | 19 | 340 | 1 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332000.1 | 0 | 19 | 381 | 31 | 373 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519678.1 | 0 | 5 | 339 | 1 | 340 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 22 | 341 | 2 | 316 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3f55_C | 0 | 22 | 341 | 2 | 316 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3f55_B | 0 | 22 | 341 | 2 | 316 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3f55_A | 0 | 22 | 341 | 2 | 316 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3em5_D | 0 | 22 | 341 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |