| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10023340 |
| Family | GH116 |
| Protein Properties | Length: 942 Molecular Weight: 105279 Isoelectric Point: 7.649 |
| Chromosome | Chromosome/Scaffold: 98 Start: 604947 End: 610070 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 519 | 880 | 0 |
| GQFLYLEGIEYLMWNTYDVHFYSSFALVMLFPKLQLSVQRDFAAAVIMHDPSKMIVLHDGRWVSRKALGAVPHDIGLHDPWFEVNAYCLYNTDRWKDLNL KFVLQVYRDVVATGDKKFAKAVWPSVYMAVAFMDQFDKDRDGMIENEGFPDQTYDTWTVSGVSAYTGGLWVAALQAASALAGLVGDKGSQVHFWLKFQKA KSVYGKLWNGSYFDYDNSGSRNSKSIQADQLAGQWYAQACGLLPIVDKAKAQSALEKVFNFNVMKVKDGKRGALNGMLPDGTVDMLNTQSREIWSGVTYA VSASMIQEGLTDMGFKTASGVYETSWSERGLGYGFQTPEAWNTNDQYRSLCYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 942 Download |
| MVENGDRNNV ASKKSENKVD PGKPAILTWQ RKLNTQLTRL RQFRLTLNET VQLMPMCFRL 60 ERYKREEIAK GRDGFFLNPF GKRHITSSHG VPLGGIGSGS IGRSFRGEFQ RWQLSPGMCE 120 GAPVLANQFS AFISRSNGRK YSSVLCPRAP DMIIELTIVF LRDPAVSGIG SWDWKLKGDR 180 STYDALYPRA WTTYEGEPDP QLKIVCRQLS PVIPHNYKES SYPVAVFTFT LHNTGQTAAD 240 ASLLFTWANS VGGDSGSTGQ HVNSTETRED GVQCILLHHR TAKESPMTFA IAAQESTGVR 300 VSKCPRFVIS GNFEGGVSAK DMWDHMKKHG MFDNLKRATE VSQPSEPGSS IGAGIAATVT 360 LQPNEVRTVT FSLAWDCPEA NFQGGRTYHR RYTKFFGAHG NAAANIAHEA ILNHSHWESQ 420 IEEWQRPILE DKTFPECVDR HVELREVFYG SPPVHSLETL GVTKLSLDNP GGILETNRSV 480 TASSILESMA SKLHQIHTPV ASNSAIGTNL LDEGEENIGQ FLYLEGIEYL MWNTYDVHFY 540 SSFALVMLFP KLQLSVQRDF AAAVIMHDPS KMIVLHDGRW VSRKALGAVP HDIGLHDPWF 600 EVNAYCLYNT DRWKDLNLKF VLQVYRDVVA TGDKKFAKAV WPSVYMAVAF MDQFDKDRDG 660 MIENEGFPDQ TYDTWTVSGV SAYTGGLWVA ALQAASALAG LVGDKGSQVH FWLKFQKAKS 720 VYGKLWNGSY FDYDNSGSRN SKSIQADQLA GQWYAQACGL LPIVDKAKAQ SALEKVFNFN 780 VMKVKDGKRG ALNGMLPDGT VDMLNTQSRE IWSGVTYAVS ASMIQEGLTD MGFKTASGVY 840 ETSWSERGLG YGFQTPEAWN TNDQYRSLCY MRPLAIWAMQ WEFSRKKLAQ QEMKVPVMED 900 YPSAEDAGFA KVARFLRLPE SNQSKSLFQT VYDYASKKLG Y* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 7.0e-17 | 163 | 436 | 288 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 5.0e-57 | 90 | 393 | 315 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 4.0e-64 | 518 | 879 | 382 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 3.0e-161 | 519 | 881 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_199801.2 | 0 | 15 | 939 | 19 | 955 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002264575.1 | 0 | 2 | 939 | 6 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328722.1 | 0 | 18 | 939 | 1 | 922 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331126.1 | 0 | 17 | 941 | 24 | 947 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528846.1 | 0 | 18 | 941 | 24 | 951 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292040 | 359 | 532 | 887 | 0 |
| JG703027 | 328 | 537 | 864 | 0 |
| FC917648 | 306 | 532 | 837 | 0 |
| JG704091 | 299 | 566 | 864 | 0 |
| JG705121 | 298 | 567 | 864 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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